RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 DACT3Q96B18 629 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 SLC39A13Q96H72 371 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 NLRP4Q96MN2 994 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 FAM193BQ96PV7 902 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 RIT2Q99578 217 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 TACO1Q9BSH4 297 aaKnown RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 TEKT3Q9BXF9 490 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 SLC26A6Q9BXS9 759 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 INO80BQ9C086 356 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 ARNT2Q9HBZ2 717 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 PARD6AQ9NPB6 346 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 FBXO10Q9UK96 956 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 PCDHB2Q9Y5E7 798 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 DMDP11532 3685 aa5.71□□□□□ -1.49
PTCD3-219ENST00000494323 C2orf16Q68DN1 1984 aa5.71□□□□□ -1.49
PTCD3-219ENST00000494323 ZNF292O60281 2723 aa5.71□□□□□ -1.49
PTCD3-219ENST00000494323 TPRP12270 2363 aaKnown RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 F8W810 466 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 NRP1O14786 923 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 XPOTO43592 962 aaKnown RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 DTNBO60941 627 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 ZNF623O75123 536 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 RFPL2O75678 378 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 TDP2O95551 362 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 KNG1P01042 644 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 CLEC2LP0C7M8 214 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 HOXA5P20719 270 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 AGXTP21549 392 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 CCND1P24385 295 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 RPL13P26373 211 aaKnown RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 HOXA11P31270 313 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 KRT32Q14532 448 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 WDR72Q3MJ13 1102 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 Q4G0T1 1027 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 SPECC1Q5M775 1068 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 PRR31Q5SQ13 230 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 PHF19Q5T6S3 580 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 CCDC149Q6ZUS6 474 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 ANO5Q75V66 913 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 LYSMD2Q8IV50 215 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 CCDC105Q8IYK2 499 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 KIAA2013Q8IYS2 634 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 SLC44A3Q8N4M1 653 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 BICD2Q8TD16 824 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 RABGGTAQ92696 567 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 PGBD4Q96DM1 585 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 HSPBAP1Q96EW2 488 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 B3GALT6Q96L58 329 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 JAKMIP1Q96N16 626 aaKnown RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 RTP3Q9BQQ7 232 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 MINDY3Q9H8M7 445 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 SFXN1Q9H9B4 322 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 IFT122Q9HBG6 1241 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 MRPL17Q9NRX2 175 aaKnown RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 SPATA6Q9NWH7 488 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 MIOSQ9NXC5 875 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 OBP2AQ9NY56 170 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 KCMF1Q9P0J7 381 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 TMPRSS11EQ9UL52 423 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 CA14Q9ULX7 337 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 PRG3Q9Y2Y8 225 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-219ENST00000494323 NUMBLQ9Y6R0 609 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 R4GN57 208 aa5.71□□□□□ -1.5
PTCD3-219ENST00000494323 CEP250Q9BV73 2442 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 ADAMTS20P59510 1910 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 DOCK8Q8NF50 2099 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 GPR179Q6PRD1 2367 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 A0A087WWV3 80 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 KLHL33A6NCF5 533 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 VSTM5A8MXK1 200 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 TEX28O15482 410 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 TRIM13O60858 407 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 DCNP07585 359 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 RPL17P18621 184 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 PDIA3P30101 505 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 OR1G1P47890 313 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 RCAN1P53805 252 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 PSMC5P62195 406 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 LAMTOR4Q0VGL1 99 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 HLTFQ14527 1009 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 NOLC1Q14978 699 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 UGT8Q16880 541 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 GFOD2Q3B7J2 385 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 PITRM1Q5JRX3 1037 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 UBXN11Q5T124 520 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 TRMT10BQ6PF06 316 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 BLOC1S2Q6QNY1 142 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 B3GNT9Q6UX72 402 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 MRPL10Q7Z7H8 261 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 ZNF410Q86VK4 478 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 COLGALT2Q8IYK4 626 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 DCLK2Q8N568 766 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 URGCPQ8TCY9 931 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 SMG7Q92540 1137 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 RMDN1Q96DB5 314 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 RAX2Q96IS3 184 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 CPB2Q96IY4 423 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 CEP170P1Q96L14 293 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 AIFM3Q96NN9 605 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 KCNC2Q96PR1 638 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms