RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PSTPIP1O43586 416 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 IL18RAPO95256 599 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 TSPAN15O95858 294 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CYP1A1P04798 512 aaPredicted RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 CALB1P05937 261 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 MMEP08473 750 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CLTAP09496 248 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 HOXC6P09630 235 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 C6orf222P0C671 652 aaPredicted RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 UNGP13051 313 aaPredicted RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 COMTP21964 271 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 MAPK4P31152 587 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CHKAP35790 457 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 TCF7P36402 384 aaPredicted RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 RAP1GAPP47736 663 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 PEX5P50542 639 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CDC42EP1Q00587 391 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 SP2Q02086 613 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 TNFAIP2Q03169 654 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 PRKG2Q13237 762 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 MESDQ14696 234 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 ZSCAN26Q16670 478 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 ZNF484Q5JVG2 852 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 TREML2Q5T2D2 321 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 INTS11Q5TA45 600 aaKnown RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 AGBL2Q5U5Z8 902 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 DUPD1Q68J44 220 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 KDM7AQ6ZMT4 941 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 HOOK3Q86VS8 718 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 PHF13Q86YI8 300 aaPredicted RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 MCOLN2Q8IZK6 566 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CHCHD4Q8N4Q1 142 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 BBOF1Q8ND07 529 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 C3orf20Q8ND61 904 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 C1orf162Q8NEQ5 155 aaPredicted RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 CCHCR1Q8TD31 782 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 GLG1Q92896 1179 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 AHCYL2Q96HN2 611 aaKnown RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 TSPAN18Q96SJ8 248 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 PPP1R16BQ96T49 567 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 PCDHB18PQ96TA0 734 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 FMO2Q99518 471 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 MMP19Q99542 508 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 ORAI3Q9BRQ5 295 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 KIFC3Q9BVG8 833 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 AP1M1Q9BXS5 423 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CAPS2Q9BXY5 557 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 FOXP3Q9BZS1 431 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 DDX47Q9H0S4 455 aaKnown RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 ASCC2Q9H1I8 757 aaPredicted RBP8.09□□□□□ -1.11
SNX13-208ENST00000482558 LRRC19Q9H756 370 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 SPON1Q9HCB6 807 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 TAS2R14Q9NYV8 317 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNX13-208ENST00000482558 SMARCAL1Q9NZC9 954 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 EHD2Q9NZN4 543 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 BTBD7Q9P203 1132 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 COG5Q9UP83 839 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CEP83Q9Y592 693 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 COL1A2P08123 1366 aa8.09□□□□□ -1.12
SNX13-208ENST00000482558 PAPPA2Q9BXP8 1791 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PTPRFP10586 1907 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 ACKR2O00590 384 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 TPP1O14773 563 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 TNFRSF10CO14798 259 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 MED7O43513 233 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 STRNO43815 780 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PPFIA2O75334 1257 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 ULK1O75385 1050 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 LRIG2O94898 1065 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 ZBED1O96006 694 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 TNNC2P02585 160 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 CEACAM5P06731 702 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 RNASE9P60153 205 aaKnown RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 CNTN2Q02246 1040 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 SP4Q02446 784 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 SNAPC2Q13487 334 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 TRPC3Q13507 836 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 CAPSQ13938 189 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
SNX13-208ENST00000482558 FAM187BQ17R55 369 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 BBS9Q3SYG4 887 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PIK3R6Q5UE93 754 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 LRRC38Q5VT99 294 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PRAMEF18Q5VWM3 479 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 TDRD10Q5VZ19 366 aaKnown RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 FAAH2Q6GMR7 532 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 FAM180BQ6P0A1 224 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 SLC13A5Q86YT5 568 aaPredicted RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 ZSCAN18Q8TBC5 510 aaPredicted RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 CYB5D2Q8WUJ1 264 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PRPF31Q8WWY3 499 aaKnown RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 MAGOHBQ96A72 148 aaKnown RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 TMEM143Q96AN5 459 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 PAWRQ96IZ0 340 aaKnown RBP8.08□□□□□ -1.12
SNX13-208ENST00000482558 ATP6V1G3Q96LB4 118 aa8.08□□□□□ -1.12
SNX13-208ENST00000482558 MAGEB10Q96LZ2 347 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms