RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 HNRNPRO43390 633 aaKnown RBP8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 PRAMEF10O60809 474 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 MFAP3LO75121 409 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 IPO13O94829 963 aaKnown RBP8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 GPANK1O95872 356 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 ELANEP08246 267 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 INHBBP09529 407 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 TMEM225BP0DP42 221 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 IL11P20809 199 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 PRKCHP24723 683 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 RCAN1P53805 252 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 TBL3Q12788 808 aaKnown RBP8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 SEMA3BQ13214 749 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 THOC5Q13769 683 aaKnown RBP8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 IKBIPQ70UQ0 350 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 RPAP2Q8IXW5 612 aaPredicted RBP8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 ZCCHC10Q8TBK6 192 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 LMF1Q96S06 567 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 YME1L1Q96TA2 773 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 TEX101Q9BY14 249 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 RANBP17Q9H2T7 1088 aaKnown RBP8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 MUC13Q9H3R2 512 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 VEZTQ9HBM0 779 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 SARDHQ9UL12 918 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 SLC12A4Q9UP95 1085 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 DISP1Q96F81 1524 aa8.03□□□□□ -1.12
GAPVD1-217ENST00000479511 CTTNBP2Q8WZ74 1663 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 CFAP74Q9C0B2 1584 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 A0A1W2PS29 197 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 VILLO15195 856 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 NKX2-8O15522 239 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 HLA-DOAP06340 250 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 PDHA1P08559 390 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 CLTBP09497 229 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 CSH1P0DML2 217 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 CSH2P0DML3 217 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 LYL1P12980 280 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 PTMSP20962 102 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 APOBEC3AP31941 199 aaPredicted RBP8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 ICAM3P32942 547 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 CDH15P55291 814 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 FOXL2P58012 376 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 EIF4A1P60842 406 aaKnown RBP8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 CHAF1BQ13112 559 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 TUBB3Q13509 450 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 KCNJ12Q14500 433 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D10BQ4KMP7 808 aaPredicted RBP8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 LRRC55Q6ZSA7 311 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 RAB11FIP4Q86YS3 637 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 SRBD1Q8N5C6 995 aaKnown RBP8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 TP53I13Q8NBR0 393 aaPredicted RBP8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 ETNPPLQ8TBG4 499 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 SH3KBP1Q96B97 665 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 RNFT2Q96EX2 444 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 WDYHV1Q96HA8 205 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 BAG1Q99933 345 aaPredicted RBP8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 CLPBQ9H078 707 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 FAM53CQ9NYF3 392 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 UBE2J1Q9Y385 318 aaPredicted RBP8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 RICTORQ6R327 1708 aa8.02□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3DA0A087WVF3 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3IA0A087WXS9 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3EA0A087X179 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3KA0A087X1G2 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3BA6NDS4 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 PABPN1LA6NDY0 278 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3FA6NER0 549 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3LB9A6J9 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 PPM1DO15297 605 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 ERN1O75460 977 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 ERAL1O75616 437 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3HP0C7X1 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 MTHFSP49914 203 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 CDC16Q13042 620 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 PREPLQ4J6C6 727 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 ZNF766Q5HY98 468 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 ZNF772Q68DY9 489 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3GQ6DHY5 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3CQ6IPX1 549 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TBC1D3Q8IZP1 549 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 SSH3Q8TE77 659 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 OVCA2Q8WZ82 227 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 TMEM125Q96AQ2 219 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 CALML4Q96GE6 196 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 FTOQ9C0B1 505 aaKnown RBP eCLIP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 AMBRA1Q9C0C7 1298 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 SERHL2Q9H4I8 314 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 MSL2Q9HCI7 577 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 BEX4Q9NWD9 120 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 CFDP1Q9UEE9 299 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 ENTPD2Q9Y5L3 495 aa8.01□□□□□ -1.13
GAPVD1-217ENST00000479511 CCDC187A0A096LP49 1063 aa8□□□□□ -1.13
GAPVD1-217ENST00000479511 BEST1O76090 585 aa8□□□□□ -1.13
GAPVD1-217ENST00000479511 URODP06132 367 aa8□□□□□ -1.13
GAPVD1-217ENST00000479511 SNX16P57768 344 aa8□□□□□ -1.13
GAPVD1-217ENST00000479511 JAG1P78504 1218 aa8□□□□□ -1.13
GAPVD1-217ENST00000479511 FPGSQ05932 587 aa8□□□□□ -1.13
GAPVD1-217ENST00000479511 FOXL1Q12952 345 aa8□□□□□ -1.13
GAPVD1-217ENST00000479511 HLXQ14774 488 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms