RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 FNBP1Q96RU3 617 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 GORASP1Q9BQQ3 440 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 MXRA8Q9BRK3 442 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 C22orf23Q9BZE7 217 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 EPN3Q9H201 632 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 C6orf50Q9HD87 102 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 NTMQ9P121 344 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 SLC9A2Q9UBY0 812 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 PCDHA6Q9UN73 950 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 PCDHB2Q9Y5E7 798 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 PCDHA8Q9Y5H6 950 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 CYP46A1Q9Y6A2 500 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 KNL1Q8NG31 2342 aa4.79□□□□□ -1.64
CNN3-204ENST00000461018 NBASA2RRP1 2371 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 SMCO2A6NFE2 343 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 HGSO14964 777 aaPredicted RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 PRODHO43272 600 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 OPHN1O60890 802 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 ZNF623O75123 536 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 GJB3O75712 270 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 STK10O94804 968 aaKnown RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 CFIP05156 583 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 CENPBP07199 599 aaPredicted RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 HNRNPLP14866 589 aaKnown RBP eCLIP4.78□□□□□ -1.64
CNN3-204ENST00000461018 RXRAP19793 462 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 PDIA3P30101 505 aaKnown RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 CIITAP33076 1130 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 AKAP17AQ02040 695 aaKnown RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 SEMG2Q02383 582 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 PLP2Q04941 152 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 DSC1Q08554 894 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 LMAN2Q12907 356 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 MYO1EQ12965 1108 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 HSP90AA2PQ14568 343 aaPredicted RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 ANKRD1Q15327 319 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 NTRK3Q16288 839 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 USP41Q3LFD5 358 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 ZNF484Q5JVG2 852 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 STXBP5Q5T5C0 1151 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 ACBD5Q5T8D3 534 aaPredicted RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 LIN9Q5TKA1 542 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 STEAP3Q658P3 488 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 SWSAP1Q6NVH7 229 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 CPLX2Q6PUV4 134 aaKnown RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 ABHD15Q6UXT9 468 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 MRPL10Q7Z7H8 261 aaKnown RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 CEP57Q86XR8 500 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 HDDC3Q8N4P3 179 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 CSGALNACT1Q8TDX6 532 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 SMARCD2Q92925 531 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 FAM193BQ96PV7 902 aaPredicted RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 GAD1Q99259 594 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 SDF4Q9BRK5 362 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 BDH2Q9BUT1 245 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 JAM3Q9BX67 310 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 NUSAP1Q9BXS6 441 aaKnown RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 LRRC2Q9BYS8 371 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 ANO3Q9BYT9 981 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 CXCL16Q9H2A7 254 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 C8orf33Q9H7E9 229 aaPredicted RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 CPNE5Q9HCH3 593 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 KCNH7Q9NS40 1196 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 TBC1D22BQ9NU19 505 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 DACT1Q9NYF0 836 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 PIN4Q9Y237 131 aaKnown RBP4.78□□□□□ -1.64
CNN3-204ENST00000461018 SSX2IPQ9Y2D8 614 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 HES2Q9Y543 173 aa4.78□□□□□ -1.64
CNN3-204ENST00000461018 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 IGLV3-22A0A075B6J6 115 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 A0A087WZ62 844 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 BLACEA4D250 179 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 SH3D21A4FU49 640 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 KLF4O43474 513 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 PRICKLE3O43900 615 aaPredicted RBP4.77□□□□□ -1.65
CNN3-204ENST00000461018 DLX3O60479 287 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 CDKL5O76039 1030 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 DEXIO95424 95 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 SEC24AO95486 1093 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 C1RP00736 705 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 PTPN2P17706 415 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 CR2P20023 1033 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 HOXA9P31269 272 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 OR1D2P34982 312 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 IL12RB1P42701 662 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 SLC6A11P48066 632 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 SCNN1GP51170 649 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 MLLT6P55198 1093 aaPredicted RBP4.77□□□□□ -1.65
CNN3-204ENST00000461018 TLE3Q04726 772 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 CCDC173Q0VFZ6 552 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 TEAD2Q15562 447 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 MAPK6Q16659 721 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 UBE2SQ16763 222 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 TMEM196Q5HYL7 178 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 SLC35F1Q5T1Q4 408 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 MOXD1Q6UVY6 613 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 SKAP1Q86WV1 359 aa4.77□□□□□ -1.65
CNN3-204ENST00000461018 RALGPS2Q86X27 583 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms