RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 KLHL2O95198 593 aa8.83□□□□□ -1
HPS4-206ENST00000439453 TGFB3P10600 412 aa8.83□□□□□ -1
HPS4-206ENST00000439453 NPTX2P47972 431 aa8.83□□□□□ -1
HPS4-206ENST00000439453 BTKQ06187 659 aa8.83□□□□□ -1
HPS4-206ENST00000439453 STX3Q13277 289 aa8.83□□□□□ -1
HPS4-206ENST00000439453 TUBB3Q13509 450 aa8.83□□□□□ -1
HPS4-206ENST00000439453 OGFRL1Q5TC84 451 aaPredicted RBP8.83□□□□□ -1
HPS4-206ENST00000439453 PPP1R2P3Q6NXS1 205 aa8.83□□□□□ -1
HPS4-206ENST00000439453 DNAJC24Q6P3W2 148 aa8.83□□□□□ -1
HPS4-206ENST00000439453 ISLR2Q6UXK2 745 aa8.83□□□□□ -1
HPS4-206ENST00000439453 ANO5Q75V66 913 aa8.83□□□□□ -1
HPS4-206ENST00000439453 NIPA1Q7RTP0 329 aa8.83□□□□□ -1
HPS4-206ENST00000439453 NECAB2Q7Z6G3 386 aa8.83□□□□□ -1
HPS4-206ENST00000439453 TTC13Q8NBP0 860 aa8.83□□□□□ -1
HPS4-206ENST00000439453 ARRDC4Q8NCT1 418 aa8.83□□□□□ -1
HPS4-206ENST00000439453 RAB3IL1Q8TBN0 382 aa8.83□□□□□ -1
HPS4-206ENST00000439453 AFG1LQ8WV93 481 aa8.83□□□□□ -1
HPS4-206ENST00000439453 CFAP36Q96G28 342 aa8.83□□□□□ -1
HPS4-206ENST00000439453 ZFRQ96KR1 1074 aaKnown RBP8.83□□□□□ -1
HPS4-206ENST00000439453 FAM213AQ9BRX8 229 aa8.83□□□□□ -1
HPS4-206ENST00000439453 APOL6Q9BWW8 343 aa8.83□□□□□ -1
HPS4-206ENST00000439453 MRPS26Q9BYN8 205 aaKnown RBP8.83□□□□□ -1
HPS4-206ENST00000439453 FRMD8P1Q9BZ68 369 aaPredicted RBP8.83□□□□□ -1
HPS4-206ENST00000439453 GRIP2Q9C0E4 1043 aa8.83□□□□□ -1
HPS4-206ENST00000439453 SUDS3Q9H7L9 328 aaPredicted RBP8.83□□□□□ -1
HPS4-206ENST00000439453 AGO4Q9HCK5 861 aaKnown RBP8.83□□□□□ -1
HPS4-206ENST00000439453 UBAP1Q9NZ09 502 aa8.83□□□□□ -1
HPS4-206ENST00000439453 DMTF1Q9Y222 760 aa8.83□□□□□ -1
HPS4-206ENST00000439453 H3BNX3 289 aa8.82□□□□□ -1
HPS4-206ENST00000439453 HAS3O00219 553 aa8.82□□□□□ -1
HPS4-206ENST00000439453 PROCP04070 461 aa8.82□□□□□ -1
HPS4-206ENST00000439453 BPGMP07738 259 aa8.82□□□□□ -1
HPS4-206ENST00000439453 MMP8P22894 467 aa8.82□□□□□ -1
HPS4-206ENST00000439453 ALDH1A3P47895 512 aa8.82□□□□□ -1
HPS4-206ENST00000439453 TMED1Q13445 227 aa8.82□□□□□ -1
HPS4-206ENST00000439453 CUL2Q13617 745 aa8.82□□□□□ -1
HPS4-206ENST00000439453 MYLK3Q32MK0 819 aa8.82□□□□□ -1
HPS4-206ENST00000439453 RNF180Q86T96 592 aa8.82□□□□□ -1
HPS4-206ENST00000439453 FAM71DQ8N9W8 422 aa8.82□□□□□ -1
HPS4-206ENST00000439453 GAB3Q8WWW8 586 aa8.82□□□□□ -1
HPS4-206ENST00000439453 PPP1R14BQ96C90 147 aa8.82□□□□□ -1
HPS4-206ENST00000439453 PCYT2Q99447 389 aa8.82□□□□□ -1
HPS4-206ENST00000439453 GPR20Q99678 358 aa8.82□□□□□ -1
HPS4-206ENST00000439453 C16orf70Q9BSU1 422 aa8.82□□□□□ -1
HPS4-206ENST00000439453 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
HPS4-206ENST00000439453 CYP4F11Q9HBI6 524 aa8.82□□□□□ -1
HPS4-206ENST00000439453 KCNH7Q9NS40 1196 aa8.82□□□□□ -1
HPS4-206ENST00000439453 ITGA11Q9UKX5 1188 aa8.82□□□□□ -1
HPS4-206ENST00000439453 RFPL1O75677 317 aa8.82□□□□□ -1
HPS4-206ENST00000439453 GALK1P51570 392 aa8.82□□□□□ -1
HPS4-206ENST00000439453 EMP3P54852 163 aa8.82□□□□□ -1
HPS4-206ENST00000439453 DCTN2Q13561 401 aaKnown RBP8.82□□□□□ -1
HPS4-206ENST00000439453 DPYSL3Q14195 570 aa8.82□□□□□ -1
HPS4-206ENST00000439453 PIGHQ14442 188 aaPredicted RBP8.82□□□□□ -1
HPS4-206ENST00000439453 CXCL17Q6UXB2 119 aa8.82□□□□□ -1
HPS4-206ENST00000439453 ZCCHC23Q6ZST2 131 aa8.82□□□□□ -1
HPS4-206ENST00000439453 MAP7D3Q8IWC1 876 aa8.82□□□□□ -1
HPS4-206ENST00000439453 CCDC33Q8N5R6 958 aa8.82□□□□□ -1
HPS4-206ENST00000439453 PPP1R13LQ8WUF5 828 aa8.82□□□□□ -1
HPS4-206ENST00000439453 DCUN1D1Q96GG9 259 aa8.82□□□□□ -1
HPS4-206ENST00000439453 MPHOSPH6Q99547 160 aaKnown RBP8.82□□□□□ -1
HPS4-206ENST00000439453 Q9H521 79 aa8.82□□□□□ -1
HPS4-206ENST00000439453 TMEM165Q9HC07 324 aa8.82□□□□□ -1
HPS4-206ENST00000439453 XAB2Q9HCS7 855 aaKnown RBP8.82□□□□□ -1
HPS4-206ENST00000439453 PNPLA8Q9NP80 782 aa8.82□□□□□ -1
HPS4-206ENST00000439453 THAP1Q9NVV9 213 aa8.82□□□□□ -1
HPS4-206ENST00000439453 PLK2Q9NYY3 685 aa8.82□□□□□ -1
HPS4-206ENST00000439453 TTLL3Q9Y4R7 772 aa8.82□□□□□ -1
HPS4-206ENST00000439453 CHD9Q3L8U1 2897 aa8.82□□□□□ -1
HPS4-206ENST00000439453 EVPLQ92817 2033 aa8.82□□□□□ -1
HPS4-206ENST00000439453 CXorf49A8MYA2 514 aaPredicted RBP8.82□□□□□ -1
HPS4-206ENST00000439453 DNAJA2O60884 412 aa8.82□□□□□ -1
HPS4-206ENST00000439453 C1QAP02745 245 aa8.82□□□□□ -1
HPS4-206ENST00000439453 HNRNPCP07910 306 aaKnown RBP eCLIP8.82□□□□□ -1
HPS4-206ENST00000439453 HOXC8P31273 242 aa8.82□□□□□ -1
HPS4-206ENST00000439453 DMP1Q13316 513 aaPredicted RBP8.82□□□□□ -1
HPS4-206ENST00000439453 GNASQ5JWF2 1037 aa8.82□□□□□ -1
HPS4-206ENST00000439453 TCHHL1Q5QJ38 904 aaPredicted RBP8.82□□□□□ -1
HPS4-206ENST00000439453 LGSNQ5TDP6 509 aa8.82□□□□□ -1
HPS4-206ENST00000439453 DUS1LQ6P1R4 473 aaKnown RBP8.82□□□□□ -1
HPS4-206ENST00000439453 BBS12Q6ZW61 710 aa8.82□□□□□ -1
HPS4-206ENST00000439453 HPS6Q86YV9 775 aa8.82□□□□□ -1
HPS4-206ENST00000439453 ALDH16A1Q8IZ83 802 aa8.82□□□□□ -1
HPS4-206ENST00000439453 EFCAB3Q8N7B9 438 aa8.82□□□□□ -1
HPS4-206ENST00000439453 KMT5AQ9NQR1 393 aa8.82□□□□□ -1
HPS4-206ENST00000439453 MKS1Q9NXB0 559 aa8.82□□□□□ -1
HPS4-206ENST00000439453 ZNF180Q9UJW8 692 aa8.82□□□□□ -1
HPS4-206ENST00000439453 EFR3BQ9Y2G0 817 aa8.82□□□□□ -1
HPS4-206ENST00000439453 TCRBV5S1A1TA0A578 114 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ARHGAP10A1A4S6 786 aa8.81□□□□□ -1
HPS4-206ENST00000439453 BIRC5O15392 142 aa8.81□□□□□ -1
HPS4-206ENST00000439453 LYPLA2O95372 231 aa8.81□□□□□ -1
HPS4-206ENST00000439453 CCNE2O96020 404 aa8.81□□□□□ -1
HPS4-206ENST00000439453 CD4P01730 458 aa8.81□□□□□ -1
HPS4-206ENST00000439453 CALB1P05937 261 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ATP6V1B1P15313 513 aa8.81□□□□□ -1
HPS4-206ENST00000439453 NRLP54845 237 aa8.81□□□□□ -1
HPS4-206ENST00000439453 MLLT1Q03111 559 aaPredicted RBP8.81□□□□□ -1
HPS4-206ENST00000439453 MTMR1Q13613 665 aa8.81□□□□□ -1
HPS4-206ENST00000439453 BMPR2Q13873 1038 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms