RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 WDFY3Q8IZQ1 3526 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 KCNJ18B7U540 433 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 ZBTB24O43167 697 aaPredicted RBP16.85■□□□□ 0.29
DDR1-234ENST00000424544 IGLV3-19P01714 112 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 CYBBP04839 570 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 SERPINF2P08697 491 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 EEF1GP26641 437 aaKnown RBP16.85■□□□□ 0.29
DDR1-234ENST00000424544 HLA-FP30511 346 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 GPD2P43304 727 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 COPAP53621 1224 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 CETN1Q12798 172 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 KCNJ12Q14500 433 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 ZNF234Q14588 700 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 MPPE1Q53F39 396 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 TCP11X2Q5H9J9 407 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 RRAGAQ7L523 313 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 ANKS1BQ7Z6G8 1248 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 ARHGEF19Q8IW93 802 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 SIX6OS1Q8N1H7 587 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 PPM1KQ8N3J5 372 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 DEFB119Q8N690 84 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-234ENST00000424544 ANKRD20A12PQ8NF67 263 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 LMLNQ96KR4 655 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 WSB2Q9NYS7 404 aaPredicted RBP16.85■□□□□ 0.29
DDR1-234ENST00000424544 ANGPTL2Q9UKU9 493 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 CYP8B1Q9UNU6 501 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 FRYQ5TBA9 3013 aa16.85■□□□□ 0.29
DDR1-234ENST00000424544 PCDH15Q96QU1 1955 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 CKAP5Q14008 2032 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 NCAM1P13591 858 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 LCP1P13796 627 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 MTIF2P46199 727 aaKnown RBP16.84■□□□□ 0.29
DDR1-234ENST00000424544 RGS7P49802 495 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 NOVA1P51513 510 aaKnown RBP16.84■□□□□ 0.29
DDR1-234ENST00000424544 RING1Q06587 406 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 SEMA3BQ13214 749 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 E2F5Q15329 346 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 MPP7Q5T2T1 576 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 SH3PXD2AQ5TCZ1 1133 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 PIP4P1Q86T03 277 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 ADIPOR2Q86V24 386 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 TMPRSS6Q8IU80 811 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 RNF139Q8WU17 664 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 UCMAQ8WVF2 138 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 DNASE2BQ8WZ79 361 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 ERLEC1Q96DZ1 483 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
DDR1-234ENST00000424544 TMEM245Q9H330 911 aa16.84■□□□□ 0.29
DDR1-234ENST00000424544 LIMA1Q9UHB6 759 aaKnown RBP16.84■□□□□ 0.29
DDR1-234ENST00000424544 USP24Q9UPU5 2620 aa16.83■□□□□ 0.29
DDR1-234ENST00000424544 LRRC10BA6NIK2 292 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 MSI1O43347 362 aaKnown RBP16.83■□□□□ 0.28
DDR1-234ENST00000424544 CALCAP01258 141 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 BRD2P25440 801 aaKnown RBP16.83■□□□□ 0.28
DDR1-234ENST00000424544 CD6P30203 668 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 MEA1Q16626 185 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 PTPRNQ16849 979 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 FAM133BQ5BKY9 247 aaKnown RBP16.83■□□□□ 0.28
DDR1-234ENST00000424544 PIK3R6Q5UE93 754 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 BEND5Q7L4P6 421 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 CLEC4CQ8WTT0 213 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 STK32AQ8WU08 396 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 SORCS1Q8WY21 1168 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 SLC39A13Q96H72 371 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 SLC4A5Q9BY07 1137 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 PRDM16Q9HAZ2 1276 aa16.83■□□□□ 0.28
DDR1-234ENST00000424544 KNL1Q8NG31 2342 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 ATXN2Q99700 1313 aaKnown RBP16.82■□□□□ 0.28
DDR1-234ENST00000424544 GOLGA6L3A6NEY3 463 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 ARHGAP33O14559 1287 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 TSPAN3O60637 253 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 FBXO21O94952 628 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 AFPP02771 609 aaKnown RBP16.82■□□□□ 0.28
DDR1-234ENST00000424544 LTFP02788 710 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 ATP1A3P13637 1013 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 PRKCHP24723 683 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 TPMTP51580 245 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 SGSHP51688 502 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 EIF4EBP2Q13542 120 aaPredicted RBP16.82■□□□□ 0.28
DDR1-234ENST00000424544 CAMK2GQ13555 558 aaPredicted RBP16.82■□□□□ 0.28
DDR1-234ENST00000424544 GSE1Q14687 1217 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 STARD3Q14849 445 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 RABEPKQ7Z6M1 372 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 UNC45BQ8IWX7 931 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 SCUBE3Q8IX30 993 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 CADM4Q8NFZ8 388 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 FOXJ1Q92949 421 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 TOE1Q96GM8 510 aaKnown RBP16.82■□□□□ 0.28
DDR1-234ENST00000424544 HSPA12BQ96MM6 686 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
DDR1-234ENST00000424544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDR1-234ENST00000424544 CFAP47Q6ZTR5 3102 aa16.81■□□□□ 0.28
DDR1-234ENST00000424544 M0QYV0 167 aa16.81■□□□□ 0.28
DDR1-234ENST00000424544 PIK3R2O00459 728 aa16.81■□□□□ 0.28
DDR1-234ENST00000424544 GJB3O75712 270 aa16.81■□□□□ 0.28
DDR1-234ENST00000424544 TPM2P07951 284 aa16.81■□□□□ 0.28
DDR1-234ENST00000424544 OXTRP30559 389 aa16.81■□□□□ 0.28
DDR1-234ENST00000424544 SLC6A4P31645 630 aa16.81■□□□□ 0.28
DDR1-234ENST00000424544 GFPT1Q06210 699 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms