RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 MLLT6P55198 1093 aaPredicted RBP13.77□□□□□ -0.21
SEC13-209ENST00000397117 TAF12Q16514 161 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
SEC13-209ENST00000397117 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 ZFYVE27Q5T4F4 411 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 CCDC181Q5TID7 509 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 BSPRYQ5W0U4 402 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 TRNP1Q6NT89 227 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 PDZD4Q76G19 769 aaPredicted RBP13.77□□□□□ -0.21
SEC13-209ENST00000397117 ARHGAP18Q8N392 663 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 GIPC2Q8TF65 315 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 FAM172AQ8WUF8 416 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 SLC2A13Q96QE2 648 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 RAB23Q9ULC3 237 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 PIAS3Q9Y6X2 628 aa13.77□□□□□ -0.21
SEC13-209ENST00000397117 SLC38A8A6NNN8 435 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 ARNTLO00327 626 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 SLC30A4O14863 429 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 LRP3O75074 770 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 LRCH4O75427 683 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 RETP07949 1114 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 PCK1P35558 622 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 GJC1P36383 396 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 VIPR2P41587 438 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 SULT1E1P49888 294 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 CCR3P51677 355 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 RWDD2BP57060 319 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 YWHAGP61981 247 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEC13-209ENST00000397117 GAS6Q14393 721 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 PPP2R5DQ14738 602 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 VEPH1Q14D04 833 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 LPAL2Q16609 132 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 WHAMMP3Q1A5X7 153 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 SLC25A52Q3SY17 297 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 LRRC38Q5VT99 294 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 BTBD8Q5XKL5 378 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 MFSD6LQ8IWD5 586 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 STKLD1Q8NE28 680 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 COG1Q8WTW3 980 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 KRT35Q92764 455 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 FBXO32Q969P5 355 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 ZNF512Q96ME7 567 aaPredicted RBP13.76□□□□□ -0.21
SEC13-209ENST00000397117 L2HGDHQ9H9P8 463 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 ABCC13Q9NSE7 274 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 RRN3Q9NYV6 651 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 NAALADL1Q9UQQ1 740 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.76□□□□□ -0.21
SEC13-209ENST00000397117 SDK1Q7Z5N4 2213 aa13.76□□□□□ -0.21
SEC13-209ENST00000397117 CES2O00748 559 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 ZNF185O15231 689 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 HRO43593 1189 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 PRPSAP2O60256 369 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 CEP104O60308 925 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 KRT7P08729 469 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 ATF6P18850 670 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 MIPP30301 263 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 CXCL12P48061 93 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 MARCKSL1P49006 195 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 PEX5P50542 639 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 EPHB3P54753 998 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 TAS2R40P59535 323 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 USP46P62068 366 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SATB1Q01826 763 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 PLD1Q13393 1074 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SCYL2Q6P3W7 929 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 BHLHA9Q7RTU4 235 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 NETO1Q8TDF5 533 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 EDEM1Q92611 657 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 ALG3Q92685 438 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SLITRK1Q96PX8 696 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 CARD9Q9H257 536 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 RNF14Q9UBS8 474 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 PCSK1NQ9UHG2 260 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 MAGED2Q9UNF1 606 aaPredicted RBP13.75□□□□□ -0.21
SEC13-209ENST00000397117 USP24Q9UPU5 2620 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 A0A1W2PQH9 124 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 CSH1P0DML2 217 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 CSH2P0DML3 217 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 GJA1P17302 382 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 PAFAH1B1P43034 410 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
SEC13-209ENST00000397117 TWF1Q12792 350 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SH3PXD2AQ5TCZ1 1133 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SEL1L2Q5TEA6 688 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SYPL2Q5VXT5 272 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 BEND5Q7L4P6 421 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 STRADAQ7RTN6 431 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 POLNQ7Z5Q5 900 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 ELMOD1Q8N336 334 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SPEM1Q8N4L4 309 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 LEMD2Q8NC56 503 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 ZSCAN18Q8TBC5 510 aaPredicted RBP13.75□□□□□ -0.21
SEC13-209ENST00000397117 RNF139Q8WU17 664 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 TBCBQ99426 244 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms