RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PKD1L2Q7Z442 2459 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 SMG1Q96Q15 3661 aaKnown RBP10.81□□□□□ -0.68
NEDD8-202ENST00000396828 TULP2O00295 520 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 HYAL3O43820 417 aaPredicted RBP10.81□□□□□ -0.68
NEDD8-202ENST00000396828 MFAP3LO75121 409 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 GYPCP04921 128 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 PLA2G4AP47712 749 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 RAD23BP54727 409 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 MFAP3P55082 362 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 EFEMP1Q12805 493 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 LMAN2Q12907 356 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 SEMA3BQ13214 749 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 KLHDC10Q6PID8 442 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 TRMT11Q7Z4G4 463 aaKnown RBP10.81□□□□□ -0.68
NEDD8-202ENST00000396828 GATA6Q92908 595 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 HSPA12BQ96MM6 686 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 CAMK1GQ96NX5 476 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 XPO6Q96QU8 1125 aaKnown RBP10.81□□□□□ -0.68
NEDD8-202ENST00000396828 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 NIF3L1Q9GZT8 377 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 MKRN2Q9H000 416 aaKnown RBP10.81□□□□□ -0.68
NEDD8-202ENST00000396828 NUCKS1Q9H1E3 243 aaKnown RBP10.81□□□□□ -0.68
NEDD8-202ENST00000396828 CYP3A43Q9HB55 503 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 APEX2Q9UBZ4 518 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 RASAL2Q9UJF2 1139 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 ZMIZ1Q9ULJ6 1067 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 SLC6A14Q9UN76 642 aa10.81□□□□□ -0.68
NEDD8-202ENST00000396828 PENKP01210 267 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 SERPINF2P08697 491 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 CD59P13987 128 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 UCHL3P15374 230 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 KRT9P35527 623 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 IL12RB1P42701 662 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 ADKP55263 362 aaKnown RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 POLR2FP61218 127 aaKnown RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 ZBED6P86452 979 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 BYSLQ13895 437 aaKnown RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 DUOXA1Q1HG43 343 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 FUT11Q495W5 492 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 PREPLQ4J6C6 727 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 KLHDC7AQ5VTJ3 777 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 TMEM215Q68D42 235 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 BHLHA9Q7RTU4 235 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 PIGZQ86VD9 579 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 DENND1CQ8IV53 801 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 FMNL3Q8IVF7 1028 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 MINDY1Q8N5J2 469 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 KDF1Q8NAX2 398 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 RBBP8NLQ8NC74 664 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 OR8K1Q8NGG5 319 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 SORCS1Q8WY21 1168 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 ZNF419Q96HQ0 510 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 HEXIM2Q96MH2 286 aaKnown RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 NT5C1BQ96P26 610 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 SPAG5Q96R06 1193 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 TTYH3Q9C0H2 523 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 PNPLA8Q9NP80 782 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 CISHQ9NSE2 258 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 ZNHIT6Q9NWK9 470 aaKnown RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 LSM7Q9UK45 103 aaKnown RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 KLK13Q9UKR3 277 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 AGO1Q9UL18 857 aaKnown RBP10.8□□□□□ -0.68
NEDD8-202ENST00000396828 STON1Q9Y6Q2 735 aa10.8□□□□□ -0.68
NEDD8-202ENST00000396828 ANKRD11Q6UB99 2663 aaPredicted RBP10.79□□□□□ -0.68
NEDD8-202ENST00000396828 ARHGAP33O14559 1287 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 GJB3O75712 270 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 CORO1AP31146 461 aaKnown RBP10.79□□□□□ -0.68
NEDD8-202ENST00000396828 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
NEDD8-202ENST00000396828 SIM1P81133 766 aaPredicted RBP10.79□□□□□ -0.68
NEDD8-202ENST00000396828 GFPT1Q06210 699 aaPredicted RBP10.79□□□□□ -0.68
NEDD8-202ENST00000396828 GOLGA8FQ08AF8 430 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 GOLGA8DPQ0D2H9 430 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 LRMPQ12912 555 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 HS1BP3Q53T59 392 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 RAB41Q5JT25 222 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 SDE2Q6IQ49 451 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 KIAA1324Q6UXG2 1013 aaKnown RBP10.79□□□□□ -0.68
NEDD8-202ENST00000396828 SLC36A4Q6YBV0 504 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 ENOSF1Q7L5Y1 443 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 LRRC8AQ8IWT6 810 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 ZNF276Q8N554 614 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 CCDC112Q8NEF3 446 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 LMO3Q8TAP4 145 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 TMEM176AQ96HP8 235 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 PIWIL1Q96J94 861 aaKnown RBP10.79□□□□□ -0.68
NEDD8-202ENST00000396828 PANX2Q96RD6 677 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 GANQ9H2C0 597 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 SIX2Q9NPC8 291 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 NLRC4Q9NPP4 1024 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 ABHD10Q9NUJ1 306 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 CLIC5Q9NZA1 410 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 DNAJC12Q9UKB3 198 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 MYO6Q9UM54 1294 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 SLC27A6Q9Y2P4 619 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 SLCO1B1Q9Y6L6 691 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 BPTFQ12830 3046 aa10.79□□□□□ -0.68
NEDD8-202ENST00000396828 SLC12A8A0AV02 714 aa10.78□□□□□ -0.68
NEDD8-202ENST00000396828 EPHB6O15197 1021 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms