RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 MRPL42Q9Y6G3 142 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 PDCD11Q14690 1871 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 HTTP42858 3142 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 DPYSL4O14531 572 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 MFSD11O43934 449 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 SORBS2O94875 1100 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 TSHRP16473 764 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC8A3P57103 927 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 THOC5Q13769 683 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 SNX17Q15036 470 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 RBM15BQ8NDT2 890 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 DEPDC1BQ8WUY9 529 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 LRRC42Q9Y546 428 aa13.91□□□□□ -0.18
GTF2F1-201ENST00000394456 FAM159BA6NKW6 160 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 PRR5-ARHGAP8B1AHC4 643 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 USP12O75317 370 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 BEST1O76090 585 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 RARBP10826 455 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 MGAT1P26572 445 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 NDUFV1P49821 464 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 ARHGAP8P85298 464 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 PEX6Q13608 980 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 KBTBD2Q8IY47 623 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 TEX9Q8N6V9 391 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 SLC2A14Q8TDB8 520 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 KBTBD7Q8WVZ9 684 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 AZIN2Q96A70 460 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 MCUR1Q96AQ8 359 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 SPDL1Q96EA4 605 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 SIRPGQ9P1W8 387 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 CAPN9O14815 690 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 DNAJC6O75061 913 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 ALDOAP04075 364 aaKnown RBP13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 CD1EP15812 388 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 ACAT1P24752 427 aaKnown RBP13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 CCNFP41002 786 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 C17orf99Q6UX52 265 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 POU5F2Q8N7G0 328 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 STKLD1Q8NE28 680 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 GSDMBQ8TAX9 411 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 ADAM32Q8TC27 787 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 USP6NLQ92738 828 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 FAM161BQ96MY7 647 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 ZNF670Q9BS34 389 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 OSBPL1AQ9BXW6 950 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 AP5M1Q9H0R1 490 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 DONSONQ9NYP3 566 aa13.9□□□□□ -0.18
GTF2F1-201ENST00000394456 MYADML2A6NDP7 307 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 CAPN14A8MX76 684 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 SMAPO00193 183 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 TNPO2O14787 897 aaKnown RBP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 NEBLO76041 1014 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 TGDSO95455 350 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 PGM1P36871 562 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 MLH1P40692 756 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 CPT1AP50416 773 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 ADAM17P78536 824 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 VWA5B1Q5TIE3 1220 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 RSPH3Q86UC2 560 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 EFCAB3Q8N7B9 438 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 TEKT4Q8WW24 435 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 C11orf84Q9BUA3 381 aaPredicted RBP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 HBS1LQ9Y450 684 aaKnown RBP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 MANSC4A6NHS7 340 aaPredicted RBP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 I3L4J1 428 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 TPP1O14773 563 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 MDM4O15151 490 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 PRKCGP05129 697 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 BPGMP07738 259 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 ERVK-10P10266 1014 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 CTGFP29279 349 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 BLMHQ13867 455 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 ZBTB6Q15916 424 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 OTUD1Q5VV17 481 aaPredicted RBP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 SNX30Q5VWJ9 437 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 RNF169Q8NCN4 708 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 FAM149B1Q96BN6 582 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 PLEKHA5Q9HAU0 1116 aa13.89□□□□□ -0.19
GTF2F1-201ENST00000394456 ZNF638Q14966 1978 aaKnown RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 KCNK1O00180 336 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 HAS3O00219 553 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 GCATO75600 419 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 SPAG6O75602 509 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 USP1O94782 785 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 LINGO3P0C6S8 592 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 PSMB4P28070 264 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 RGS2P41220 211 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 MAGEA6P43360 314 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 AP1B1Q10567 949 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 CCDC6Q16204 474 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms