RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 POMPQ9Y244 141 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 SF3B1O75533 1304 aaKnown RBP eCLIP12.51□□□□□ -0.416e-6■■■■■ 105.7
C9orf3-203ENST00000375315 ZNFX1Q9P2E3 1918 aaKnown RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 MYOCOSA0A1B0GUC4 107 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 MANSC4A6NHS7 340 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 E5RJQ4 531 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 STAMBPO95630 424 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 MYL3P08590 195 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 CTGFP29279 349 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 ETV4P43268 484 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 COPAP53621 1224 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 C21orf59P57076 290 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 NLRP11P59045 1033 aaKnown RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 GTF2BQ00403 316 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 TRIM32Q13049 653 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 CLEC16AQ2KHT3 1053 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 ZNF829Q3KNS6 432 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 SCARA3Q6AZY7 606 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 PGM2L1Q6PCE3 622 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 ELMSAN1Q6PJG2 1045 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 CCDC33Q8N5R6 958 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 SHCBP1Q8NEM2 672 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 SHKBP1Q8TBC3 707 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 FAM118BQ9BPY3 351 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 HERPUD2Q9BSE4 406 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 SMARCAD1Q9H4L7 1026 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 CDH22Q9UJ99 828 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 IQANK1A0A1B0GTG1 560 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 ATG7O95352 703 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 ESRRBO95718 433 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 MAPTP10636 758 aaKnown RBP12.5□□□□□ -0.41
C9orf3-203ENST00000375315 WNT7BP56706 349 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 TMPRSS15P98073 1019 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 LAMTOR4Q0VGL1 99 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 CETN1Q12798 172 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 ANKDD1AQ495B1 522 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 CRLF3Q8IUI8 442 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 ACTRT2Q8TDY3 377 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 EME1Q96AY2 570 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 CCDC68Q9H2F9 335 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 DHX33Q9H6R0 707 aaKnown RBP12.5□□□□□ -0.41
C9orf3-203ENST00000375315 ZFYVE28Q9HCC9 887 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 PCDHGB4Q9UN71 923 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 GABRQQ9UN88 632 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 PCDHGB5Q9Y5G0 923 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 CYP2C9P11712 490 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 TNFSF9P41273 254 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 UBAP2LQ14157 1087 aaKnown RBP12.5□□□□□ -0.41
C9orf3-203ENST00000375315 RALGPS1Q5JS13 557 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 KBTBD6Q86V97 674 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 MZB1Q8WU39 189 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 SREK1Q8WXA9 508 aaKnown RBP12.5□□□□□ -0.41
C9orf3-203ENST00000375315 USP6NLQ92738 828 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 SGF29Q96ES7 293 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 TPK1Q9H3S4 243 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 GIN1Q9NXP7 522 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 ERAP1Q9NZ08 941 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 ANAPC7Q9UJX3 599 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 EXOC7Q9UPT5 735 aa12.5□□□□□ -0.41
C9orf3-203ENST00000375315 GNEQ9Y223 722 aaKnown RBP12.5□□□□□ -0.41
C9orf3-203ENST00000375315 A0A087WZ62 844 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 SOBPA7XYQ1 873 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 MCF2LO15068 1137 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 KLHL2O95198 593 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 PGK1P00558 417 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 FUCA1P04066 466 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 ELNP15502 786 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 SLC5A3P53794 718 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 GPS1Q13098 491 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 TFDP1Q14186 410 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 GRB14Q14449 540 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 EFTUD2Q15029 972 aaKnown RBP eCLIP12.49□□□□□ -0.414e-7■■■□□ 18.8
C9orf3-203ENST00000375315 CCDC142Q17RM4 750 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 KIZQ2M2Z5 673 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 ITPRIPL1Q6GPH6 555 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 TMEM126BQ8IUX1 230 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 NLRP7Q8WX94 980 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 CPB2Q96IY4 423 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-203ENST00000375315 MSTO1Q9BUK6 570 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 MINDY3Q9H8M7 445 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 SLC38A7Q9NVC3 462 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 IKBKGQ9Y6K9 419 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 LCTP09848 1927 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 K7EPI3 171 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 ALDH3B2P48448 385 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 ARSEP51690 589 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 KLF1Q13351 362 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-203ENST00000375315 PSMD6Q15008 389 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 CYTH1Q15438 398 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 C16orf87Q6PH81 154 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 ADCY4Q8NFM4 1077 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 PLEKHA8Q96JA3 519 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms