RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 ZCCHC9Q8N567 271 aaKnown RBP18.63■□□□□ 0.57
CD40-202ENST00000372285 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
CD40-202ENST00000372285 RUFY1Q96T51 708 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 EPB41L4BQ9H329 900 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 FNIP2Q9P278 1114 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 SHOC2Q9UQ13 582 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 FARP1Q9Y4F1 1045 aaPredicted RBP18.63■□□□□ 0.57
CD40-202ENST00000372285 NFS1Q9Y697 457 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 PLXNA4Q9HCM2 1894 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 KCNN4O15554 427 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 OPA1O60313 960 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 MAP3K6O95382 1288 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 SLC2A3P11169 496 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 PDZD4Q76G19 769 aaPredicted RBP18.63■□□□□ 0.57
CD40-202ENST00000372285 OVCA2Q8WZ82 227 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.63■□□□□ 0.57
CD40-202ENST00000372285 MRPL17Q9NRX2 175 aaKnown RBP18.63■□□□□ 0.57
CD40-202ENST00000372285 CXXC1Q9P0U4 656 aaPredicted RBP18.63■□□□□ 0.57
CD40-202ENST00000372285 MAFFQ9ULX9 164 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 SNX10Q9Y5X0 201 aa18.63■□□□□ 0.57
CD40-202ENST00000372285 SMAPO00193 183 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 LILRB3O75022 631 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 PAGE1O75459 146 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 FGF18O76093 207 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 LRIG2O94898 1065 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 NRG1Q02297 640 aaPredicted RBP18.62■□□□□ 0.57
CD40-202ENST00000372285 CREMQ03060 361 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 C4orf22Q6V702 233 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 TRMT10CQ7L0Y3 403 aaKnown RBP18.62■□□□□ 0.57
CD40-202ENST00000372285 HOOK3Q86VS8 718 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 CCDC25Q86WR0 208 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 RELL1Q8IUW5 271 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 PPIL6Q8IXY8 311 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 HERVK_113Q902F9 699 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 CPT1BQ92523 772 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 FCRL2Q96LA5 508 aaPredicted RBP18.62■□□□□ 0.57
CD40-202ENST00000372285 ZBED2Q9BTP6 218 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 SEMA4AQ9H3S1 761 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 RXFP1Q9HBX9 757 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 PAK5Q9P286 719 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 NUP205Q92621 2012 aa18.62■□□□□ 0.57
CD40-202ENST00000372285 MKI67P46013 3256 aaKnown RBP18.61■□□□□ 0.57
CD40-202ENST00000372285 GCATO75600 419 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 HOXC13P31276 330 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 ACTN2P35609 894 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 TBX4P57082 545 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 PDK1Q15118 436 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 TRIP4Q15650 581 aaPredicted RBP18.61■□□□□ 0.57
CD40-202ENST00000372285 ARTNQ5T4W7 220 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 MANEALQ5VSG8 457 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 SNX30Q5VWJ9 437 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 C7orf61Q8IZ16 206 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 PDZD8Q8NEN9 1154 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 SP7Q8TDD2 431 aaPredicted RBP18.61■□□□□ 0.57
CD40-202ENST00000372285 TFB1MQ8WVM0 346 aaKnown RBP18.61■□□□□ 0.57
CD40-202ENST00000372285 PRCCQ92733 491 aaPredicted RBP18.61■□□□□ 0.57
CD40-202ENST00000372285 ZBTB9Q96C00 473 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 ZBP1Q9H171 429 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 CYP4F11Q9HBI6 524 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 NEU3Q9UQ49 428 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 DOCK4Q8N1I0 1966 aa18.61■□□□□ 0.57
CD40-202ENST00000372285 C5orf60A6NFR6 353 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 ZNF189O75820 626 aaPredicted RBP18.6■□□□□ 0.57
CD40-202ENST00000372285 NUDT17P0C025 328 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 CSH1P0DML2 217 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 CSH2P0DML3 217 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 EPHB2P29323 1055 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 NRLP54845 237 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 EFEMP1Q12805 493 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 PRKD1Q15139 912 aaPredicted RBP18.6■□□□□ 0.57
CD40-202ENST00000372285 C10orf120Q5SQS8 335 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 HERC6Q8IVU3 1022 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 TCEAL8Q8IYN2 117 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 NAT8LQ8N9F0 302 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 PHOSPHO2Q8TCD6 241 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 C1orf74Q96LT6 269 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 MYRFLQ96LU7 910 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 CDK5RAP1Q96SZ6 601 aaKnown RBP18.6■□□□□ 0.57
CD40-202ENST00000372285 RAD9AQ99638 391 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 MAGED2Q9UNF1 606 aaPredicted RBP18.6■□□□□ 0.57
CD40-202ENST00000372285 SSX2IPQ9Y2D8 614 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 YIPF1Q9Y548 306 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 ANAPC1Q9H1A4 1944 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 PPP1R12AO14974 1030 aaPredicted RBP18.6■□□□□ 0.57
CD40-202ENST00000372285 NCAM2O15394 837 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 IGLV3-27P01718 113 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 CTSAP10619 480 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 HMGA1P17096 107 aaKnown RBP18.6■□□□□ 0.57
CD40-202ENST00000372285 HEATR6Q6AI08 1181 aaKnown RBP18.6■□□□□ 0.57
CD40-202ENST00000372285 PWWP2AQ96N64 755 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 SIK2Q9H0K1 926 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 MARCH2Q9P0N8 246 aa18.6■□□□□ 0.57
CD40-202ENST00000372285 RIPK2O43353 540 aa18.59■□□□□ 0.57
CD40-202ENST00000372285 TBX18O95935 607 aa18.59■□□□□ 0.57
CD40-202ENST00000372285 DNAJB2P25686 324 aa18.59■□□□□ 0.57
CD40-202ENST00000372285 SERPINB6P35237 376 aa18.59■□□□□ 0.57
CD40-202ENST00000372285 ALDH1A3P47895 512 aa18.59■□□□□ 0.57
CD40-202ENST00000372285 MLLT6P55198 1093 aaPredicted RBP18.59■□□□□ 0.57
CD40-202ENST00000372285 EIF3BP55884 814 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms