RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 KLRC1P26715 233 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 KPNA1P52294 538 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ZNF200P98182 395 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 PTRHD1Q6GMV3 140 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 UTS2BQ765I0 119 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 EXOC3L1Q86VI1 746 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 MTMR9Q96QG7 549 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 CEMIPQ8WUJ3 1361 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 USP12O75317 370 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ITGA8P53708 1063 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 TRAF3Q13114 568 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 PTK7Q13308 1070 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 LY6KQ17RY6 165 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 C3orf62Q6ZUJ4 267 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 CBWD1Q9BRT8 395 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 RRAGCQ9HB90 399 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 GNPTGQ9UJJ9 305 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 GIT1Q9Y2X7 761 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 MEGF6O75095 1541 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ADAMTS13Q76LX8 1427 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 AP5Z1O43299 807 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CDH16O75309 829 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CCNA2P20248 432 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 THOP1P52888 689 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 PARP6Q2NL67 630 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 JAMLQ86YT9 394 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 TMPRSS6Q8IU80 811 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CCDC60Q8IWA6 550 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 PDPRQ8NCN5 879 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SLITRK1Q96PX8 696 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 LRMDAQ9H2I8 198 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SP140LQ9H930 580 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 DDIT4Q9NX09 232 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 PMPCBO75439 489 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 UQCRBP14927 111 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 NPTX2P47972 431 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CXCL9Q07325 125 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 NEDD8Q15843 81 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 KCNT1Q5JUK3 1230 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CDCA2Q69YH5 1023 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 C11orf96Q7Z7L8 435 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 C17orf80Q9BSJ5 609 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 PPCSQ9HAB8 311 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SIK3Q9Y2K2 1263 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 ZC3H13Q5T200 1668 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SRP72O76094 671 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 BCAP31P51572 246 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 LRRC74AQ0VAA2 488 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 PDK1Q15118 436 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 USF2Q15853 346 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 TRIM69Q86WT6 500 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 KAZALD1Q96I82 304 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 FOPNLQ96NB1 174 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 PXMP2Q9NR77 195 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 ABCB10Q9NRK6 738 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 GPATCH2LQ9NWQ4 482 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 ARL4DP49703 201 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 NCALDP61601 193 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CDH18Q13634 790 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SNAP47Q5SQN1 464 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 C6orf10Q5SRN2 563 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 FAM45BPQ6NSW5 357 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 XRRA1Q6P2D8 792 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 SYDE1Q6ZW31 735 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 ERO1BQ86YB8 467 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 CD302Q8IX05 232 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 ZNF717Q9BY31 904 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 WDCPQ9H6R7 721 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 GMIPQ9P107 970 aa11.35□□□□□ -0.59
SMARCE1-202ENST00000348513 ITIH2P19823 946 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 AVPR1AP37288 418 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 VAC14Q08AM6 782 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 MAP1SQ66K74 1059 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 RNF43Q68DV7 783 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ZNF544Q6NX49 715 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 LVRNQ6Q4G3 990 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 IKBIPQ70UQ0 350 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ARHGEF19Q8IW93 802 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 SLC22A8Q8TCC7 542 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ZMAT5Q9UDW3 170 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 PSMD3O43242 534 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ZBTB11O95625 1053 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 TMEM253P0C7T8 217 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 RBP3P10745 1247 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 CHRM3P20309 590 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 GEMIN4P57678 1058 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 C5orf22Q49AR2 442 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 PKN3Q6P5Z2 889 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 DENND5BQ6ZUT9 1274 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 RRM2BQ7LG56 351 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms