RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IL18RAPO95256 599 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TPBGLP0DKB5 382 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ADRA2BP18089 450 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 MGAT5Q09328 741 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 GRTP1Q5TC63 336 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 EIF3MQ7L2H7 374 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF571Q7Z3V5 609 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ACTRT2Q8TDY3 377 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TEX13BQ9BXU2 312 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ADPRHL2Q9NX46 363 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 KCNK4Q9NYG8 393 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TMCC2O75069 709 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ELK3P41970 407 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 RTKN2Q8IZC4 609 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 HTRA1Q92743 480 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TEKT5Q96M29 485 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ENOPH1Q9UHY7 261 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 NUDT5Q9UKK9 219 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 CDH9Q9ULB4 789 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF609O15014 1411 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 M0QYT0 321 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 ATF4P18848 351 aaPredicted RBP10.02□□□□□ -0.8
COL4A6-201ENST00000334504 ITGA3P26006 1051 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 BNC1Q01954 994 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 ORC1Q13415 861 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 EMC2Q15006 297 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 PDK2Q15119 407 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 EFCAB3Q8N7B9 438 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 MARK4Q96L34 752 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 SLC9A7Q96T83 725 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 NUDT12Q9BQG2 462 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF221Q9UK13 617 aa10.02□□□□□ -0.8
COL4A6-201ENST00000334504 NPR3P17342 541 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ADRA1DP25100 572 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 RXRGP48443 463 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ST8SIA6P61647 398 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 IL18R1Q13478 541 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 PHKG1Q16816 387 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 BTN2A1Q7KYR7 527 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CDK20Q8IZL9 346 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 KBTBD8Q8NFY9 601 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 FBXO30Q8TB52 745 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 TBCDQ9BTW9 1192 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ARHGAP20Q9P2F6 1191 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 WDR27A2RRH5 827 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CCDC162PA2VCL2 907 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 MAP2K7O14733 419 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 AREL1O15033 823 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 KHDRBS3O75525 346 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 YWHAQP27348 245 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 HALP42357 657 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 NPY2RP49146 381 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF157P51786 506 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 GPSM2P81274 684 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 DDR1Q08345 913 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ZFP69Q49AA0 526 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 LDHDQ86WU2 507 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 VMP1Q96GC9 406 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 L3MBTL3Q96JM7 780 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CCDC28BQ9BUN5 200 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 BCL2L14Q9BZR8 327 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 WDR12Q9GZL7 423 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 TDRD3Q9H7E2 651 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 MID1IP1Q9NPA3 183 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 A1CFQ9NQ94 594 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 MRPS7Q9Y2R9 242 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ERVK-7P63135 1459 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 MYO5CQ9NQX4 1742 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 TSPAN4O14817 238 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 SNX3O60493 162 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 RPS6KA5O75582 802 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CCNKO75909 580 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CAMTA2O94983 1202 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 OR6B1O95007 311 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 LTFP02788 710 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 PABPC1P11940 636 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 MSH3P20585 1137 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 GCLCP48506 637 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ACLYP53396 1101 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 FAAP100Q0VG06 881 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 MSLNQ13421 630 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 SLC15A2Q16348 729 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 RNF220Q5VTB9 566 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 DNAJC14Q6Y2X3 702 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 EXD1Q8NHP7 514 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CKAP2Q8WWK9 683 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 PROX1Q92786 737 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 GALNT8Q9NY28 637 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 PACSIN3Q9UKS6 424 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CCNT2O60583 730 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ZMPSTE24O75844 475 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 ANXA6P08133 673 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 PRKAR1AP10644 381 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CYP11B1P15538 503 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 SSTR1P30872 391 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 SNRPFP62306 86 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 CYP4F2P78329 520 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms