RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 B2RBV5 119 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PER2O15055 1255 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 RASGRP1O95267 797 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ATP6V1B2P21281 511 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 CCL14Q16627 93 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ANKS1BQ7Z6G8 1248 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 DSELQ8IZU8 1212 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 CLDND1Q9NY35 253 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 DPP7Q9UHL4 492 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 GMEB2Q9UKD1 530 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TARSP26639 723 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TOB1P50616 345 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 INPP5AQ14642 412 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 FAM129CQ86XR2 697 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 CERS5Q8N5B7 392 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TNKS2Q9H2K2 1166 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ANGPT4Q9Y264 503 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ARHGEF40Q8TER5 1519 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 GYPCP04921 128 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 UBA1P22314 1058 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ATP5C1P36542 298 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 CYP4F2P78329 520 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 GDF6Q6KF10 455 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 OTOP1Q7RTM1 612 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PLD3Q8IV08 490 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 GMCL1P1Q8NEA9 526 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 DDX28Q9NUL7 540 aaKnown RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PNPLA6Q8IY17 1366 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 AKAP3O75969 853 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 TROAPQ12815 778 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 NR1I3Q14994 352 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 ZCCHC23Q6ZST2 131 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 C18orf25Q96B23 403 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-201ENST00000303354 SEPHS2Q99611 448 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PRRG4Q9BZD6 226 aa7.99□□□□□ -1.13
SCN9A-201ENST00000303354 PREX2Q70Z35 1606 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 GRID2IPA4D2P6 1211 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 BANF1O75531 89 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 VAPBO95292 243 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 PTPN1P18031 435 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 CD86P42081 329 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 MED21Q13503 144 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 USP39Q53GS9 565 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TMC5Q6UXY8 1006 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 CIR1Q86X95 450 aaPredicted RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ATP6V1G3Q96LB4 118 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TRMT13Q9NUP7 481 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 MPP6Q9NZW5 540 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 BTN3A1O00481 513 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ACSL4O60488 711 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 SEC22BO75396 215 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ATP5BP06576 529 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ASGR1P07306 291 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 FAM228BP0C875 321 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 GJA1P17302 382 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ITIH2P19823 946 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 NOS3P29474 1203 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 NR6A1Q15406 480 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 MAPRE2Q15555 327 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 PSMD5Q16401 504 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ARID3BQ8IVW6 561 aaPredicted RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TPCN2Q8NHX9 752 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 FIG4Q92562 907 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TP53INP1Q96A56 240 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 KLRG2A4D1S0 409 aaPredicted RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ATP9AO75110 1047 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 INHAP05111 366 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 HSMCR30P0CW71 290 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ORC2Q13416 577 aaPredicted RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 GSTA3Q16772 222 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 Q4G0T1 1027 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 EMBQ6PCB8 327 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 LINGO4Q6UY18 593 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 SLC51AQ86UW1 340 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 CYP39A1Q9NYL5 469 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 GRID1Q9ULK0 1009 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 A0A0B4J269 797 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 A8MU76 341 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TREHO43280 583 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 CCDC22O60826 627 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 CYP4F8P98187 520 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TAF13Q15543 124 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 KHDRBS2Q5VWX1 349 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 RNF148Q8N7C7 305 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 GPR156Q8NFN8 814 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 SPPL2AQ8TCT8 520 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 EME1Q96AY2 570 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 RNPEPQ9H4A4 650 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 RIC8BQ9NVN3 520 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 NDE1Q9NXR1 346 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 PRKAG3Q9UGI9 489 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 LCMT1Q9UIC8 334 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 MROH7Q68CQ1 1323 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 OR6A2O95222 327 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 RARRES1P49788 294 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 GEMIN4P57678 1058 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 CACHD1Q5VU97 1274 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TYW3Q6IPR3 259 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms