RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 CES3Q6UWW8 571 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 HASPINQ8TF76 798 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 DRG1Q9Y295 367 aaKnown RBP16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 A0A096LPK6 155 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 FBXO21O94952 628 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 ABHD2P08910 425 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 TPH1P17752 444 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 DNAJB2P25686 324 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 MARSP56192 900 aaKnown RBP16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 SP3Q02447 781 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 LRRC74AQ0VAA2 488 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 TIGD7Q6NT04 549 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLC27A1Q6PCB7 646 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 MRPL9Q9BYD2 267 aaKnown RBP16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 CASTOR2A6NHX0 329 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 C5orf58C9J3I9 102 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 SNUPNO95149 360 aaKnown RBP16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 ASS1P00966 412 aaKnown RBP16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 KRT8P05787 483 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 MMP13P45452 471 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 NUP107P57740 925 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 BMT2Q1RMZ1 405 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLC44A4Q53GD3 710 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 RNF148Q8N7C7 305 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 KAT2BQ92831 832 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 TINF2Q9BSI4 451 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 TMEM161AQ9NX61 479 aa16.44■□□□□ 0.22
ARHGEF28-201ENST00000296794 HEATR9A2RTY3 570 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 HMGCRP04035 888 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ADCYAP1R1P41586 468 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 FKBP1BP68106 108 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 OVOS1Q6IE37 1185 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ANKS3Q6ZW76 656 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 SCUBE3Q8IX30 993 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 TMEM79Q9BSE2 394 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 NRDE2Q9H7Z3 1164 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 MAGEB16A2A368 324 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 NCAM2O15394 837 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 PROCP04070 461 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 CHRNB3Q05901 458 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 POU6F1Q14863 301 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 PDK4Q16654 411 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 KCNT2Q6UVM3 1135 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ITIH5Q86UX2 942 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ALLCQ8N6M5 410 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 POMCP01189 267 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 AXLP30530 894 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 TKTL1P51854 596 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 KCNMB4Q86W47 210 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 FZD1Q9UP38 647 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 FAM237BA0A1B0GVD1 139 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 KANSL1LA0AUZ9 987 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 FSCN2O14926 492 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ATP5BP06576 529 aaKnown RBP16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ACAP1Q15027 740 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 TRIM16LQ309B1 348 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 KYAT3Q6YP21 454 aaKnown RBP16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 ZNF410Q86VK4 478 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 SH3GL2Q99962 352 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 EXOSC4Q9NPD3 245 aaKnown RBP16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 SNTG2Q9NY99 539 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 WWOXQ9NZC7 414 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 IPPQ9Y573 584 aa16.43■□□□□ 0.22
ARHGEF28-201ENST00000296794 SAC3D1A6NKF1 404 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 RNF103O00237 685 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 NR2C2P49116 596 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 CPNE1Q99829 537 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 FGFBP2Q9BYJ0 223 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 ASB7Q9H672 318 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SPDYE5A6NIY4 337 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 WDR47O94967 919 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 FBXW4P57775 412 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SPDYE7PQ495Y7 208 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 LRRC38Q5VT99 294 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 C16orf46Q6P387 395 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 PATL1Q86TB9 770 aaKnown RBP16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SNX32Q86XE0 403 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 EIF3LQ9Y262 564 aaKnown RBP16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 ACKR2O00590 384 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SMNDC1O75940 238 aaKnown RBP eCLIP16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 DDHD2O94830 711 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SERPIND1P05546 499 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 CDH17Q12864 832 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 TRIM60Q495X7 471 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 CELF6Q96J87 481 aaKnown RBP16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 CLCA2Q9UQC9 943 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 E5RJQ4 531 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 KCNK1O00180 336 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 RNASEH1O60930 286 aaKnown RBP16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 ENTPD5O75356 428 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SERPINB1P30740 379 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 MMRN1Q13201 1228 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms