RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Myo5aQ99104 1853 aaKnown RBP9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Smok4aA0JLX3 433 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Apol7bB1AQP7 369 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Scml2B1AVB3 969 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 AmacrO09174 381 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rab12P35283 243 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cfl2P45591 166 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 PdxpP60487 292 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nsun7Q14AW5 724 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cpne9Q1RLL3 553 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Apol7eQ3UZ24 369 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 HjurpQ6PG16 667 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Glra2Q7TNC8 452 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Clec4b1Q7TS58 209 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ric8bQ80XE1 520 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kctd3Q8BFX3 815 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Echs1Q8BH95 290 aaKnown RBP9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfml3Q8BK62 406 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc39a6Q8C145 765 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dus1lQ8C2P3 475 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Iqsec1Q8R0S2 961 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mterf3Q8R3J4 412 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ifi44lQ9BDB7 447 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trpd52l3Q9CQ14 231 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Atp13a2Q9CTG6 1169 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fam213aQ9CYH2 218 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Q9D1K7 174 aaKnown RBP9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fthl17aQ9DAX0 182 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ccnt1Q9QWV9 724 aaKnown RBP9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Galk1Q9R0N0 392 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc26a3Q9WVC8 757 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm6133B2RY53 190 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr376E9Q4M1 320 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Krt19P19001 403 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sept1P42209 366 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Plin2P43883 425 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Hpcal1P62748 193 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 CcnjQ3TZI6 379 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nat8lQ3UGX3 299 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Q3UJC8 639 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 FaxcQ3UMF9 409 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm136Q3V037 328 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 CochQ62507 552 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nap1l4Q78ZA7 375 aaKnown RBP9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dsg4Q7TMD7 1041 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trpm4Q7TN37 1213 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Abtb2Q7TQI7 1024 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vac14Q80WQ2 782 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kbtbd3Q8BHI4 607 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 SynbQ8BI41 618 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Exoc3l1Q8BI71 739 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Serpina3bQ8BYY9 420 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tmem252Q8C353 183 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ano4Q8C5H1 955 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Bhlhe22Q8C6A8 355 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gnl3Q8CI11 538 aaKnown RBP9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Steap3Q8CI59 488 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gspt1Q8R050 636 aaKnown RBP9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ppp6r2Q8R3Q2 923 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Hkdc1Q91W97 915 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pcdhb13Q91Y06 796 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Krt5Q922U2 580 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tas1r3Q925D8 858 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 ProzQ9CQW3 399 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nip7Q9CXK8 180 aaKnown RBP9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sertad1Q9JL10 236 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Neu2Q9JMH3 379 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Plod3Q9R0E1 741 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dctn3Q9Z0Y1 186 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 4930467E23RikD3Z1P8 350 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vmn2r59E9PUT5 865 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm15319E9Q637 350 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm10354K7N6A0 256 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mpp3O88910 568 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 H2-K1P01901 369 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Myf6P15375 242 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Csn1s1P19228 313 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 S100a1P56565 94 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ptgs2Q05769 604 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rnf113a2Q14B01 337 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pld5Q3UNN8 536 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc47a2Q3V050 573 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 PRAG1Q571I4 1179 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sdc3Q64519 442 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fnip1Q68FD7 1165 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ces5aQ6AW46 575 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kcnt1Q6ZPR4 1224 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tmcc2Q80W04 706 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Zfp418Q8BFS8 652 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Depdc1bQ8BH88 529 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cnpy4Q8BQ47 245 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm21119Q8C646 350 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trim52Q8CDV4 233 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sh3d19Q91X43 789 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ralgps2Q9ERD6 590 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Krt81Q9ERE2 481 aa9.98□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Klhl32A2AJX0 620 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm12394A2AKP6 982 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Serpinb8O08800 374 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 SpibO35906 267 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms