RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 C12orf29Q8N999 325 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 WWOXQ9NZC7 414 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 ZNF229Q9UJW7 825 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 APPL1Q9UKG1 709 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 PACSIN3Q9UKS6 424 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 FSCN2O14926 492 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 GPR182O15218 404 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 PROCP04070 461 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 ZNF23P17027 643 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 PSMA4P25789 261 aaKnown RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 DDX39BQ13838 428 aaKnown RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 TRMT5Q32P41 509 aaKnown RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 GJC2Q5T442 439 aaPredicted RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 TATDN1Q6P1N9 297 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 PGLYRP2Q96PD5 576 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 FBXO21O94952 628 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 LHX1P48742 406 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 TMEM132BQ14DG7 1078 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 C2orf81A6NN90 581 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 H2AFYO75367 372 aaKnown RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 ZBTB17Q13105 803 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 ZNF177Q13360 481 aaPredicted RBP16.56■□□□□ 0.24
GABRB3-215ENST00000622697 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 BRD8Q9H0E9 1235 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 SOX13Q9UN79 622 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
GABRB3-215ENST00000622697 PDHXO00330 501 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 IFNA8P32881 189 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 DRG2P55039 364 aaKnown RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 PYDC1Q8WXC3 89 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 F5H5T6 163 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 YBX3P16989 372 aaKnown RBP eCLIP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 PSMB4P28070 264 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 CCDC85BQ15834 202 aaPredicted RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 C9orf131Q5VYM1 1079 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 TIGD7Q6NT04 549 aaPredicted RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 UBR1Q8IWV7 1749 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ZMPSTE24O75844 475 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 TRUB2O95900 331 aaKnown RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 SLC2A3P11169 496 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 PSMC3P17980 439 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 PAX7P23759 505 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 NFYCQ13952 458 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 VGLL4Q14135 290 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ARHGEF7Q14155 803 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 AASDHQ4L235 1098 aaPredicted RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ZNF470Q6ECI4 717 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 LRRC74BQ6ZQY2 392 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 APTXQ7Z2E3 356 aaKnown RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ADCK2Q7Z695 626 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 KYQ8NBH2 561 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 TMEM134Q9H6X4 195 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 NR2E1Q9Y466 385 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 hCG_1818297A0A087WSY0 165 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 TRIM13O60858 407 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ENTPD5O75356 428 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 RECQL4O94761 1208 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ALBP02768 609 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 CDH17Q12864 832 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 CDH18Q13634 790 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 GRTP1Q5TC63 336 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 CCDC81Q6ZN84 652 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ADCK1Q86TW2 530 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 OR52K1Q8NGK4 314 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ZSCAN18Q8TBC5 510 aaPredicted RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 SH3BP1Q9Y3L3 701 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 AGPSO00116 658 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 UBDO15205 165 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 LGALS2P05162 132 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 ALADP13716 330 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 KRT72Q14CN4 511 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 YTHDF3Q7Z739 585 aaKnown RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 GDPD5Q8WTR4 605 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 SNRNP27Q8WVK2 155 aaKnown RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 XPNPEP3Q9NQH7 507 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 PNMA8BQ9ULN7 279 aaPredicted RBP16.55■□□□□ 0.24
GABRB3-215ENST00000622697 STARD13Q9Y3M8 1113 aa16.55■□□□□ 0.24
GABRB3-215ENST00000622697 LCA5LO95447 670 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 RAG1P15918 1043 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 CCR1P32246 355 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 SCNN1BP51168 640 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 CATSPERGQ6ZRH7 1159 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 EFCAB3Q8N7B9 438 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 SNRNP25Q9BV90 132 aaKnown RBP16.54■□□□□ 0.24
GABRB3-215ENST00000622697 NFAT5O94916 1531 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 MROH7Q68CQ1 1323 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 GTF2H3Q13889 308 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 OASLQ15646 514 aaKnown RBP16.54■□□□□ 0.24
GABRB3-215ENST00000622697 CTXN3Q4LDR2 81 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 RASGEF1CQ8N431 466 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 JOSD2Q8TAC2 188 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 HIC2Q96JB3 615 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 MARK4Q96L34 752 aa16.54■□□□□ 0.24
GABRB3-215ENST00000622697 ACO2Q99798 780 aaKnown RBP16.54■□□□□ 0.24
GABRB3-215ENST00000622697 SPDYE5A6NIY4 337 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms