RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 EHBP1Q8NDI1 1231 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 ANKRD20A12PQ8NF67 263 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 SCAMP5Q8TAC9 235 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 LMO3Q8TAP4 145 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 GPT2Q8TD30 523 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 ZFYVE19Q96K21 471 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 LRRC3BQ96PB8 259 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 SLC22A12Q96S37 553 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 TRIM62Q9BVG3 475 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 EBF3Q9H4W6 596 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 CLMPQ9H6B4 373 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 LRRC4Q9HBW1 653 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 TMEM9BQ9NQ34 198 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 HPS4Q9NQG7 708 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 PRDM9Q9NQV7 894 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 ANO10Q9NW15 660 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 DUS2Q9NX74 493 aaKnown RBP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 GTSE1Q9NYZ3 720 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 GMIPQ9P107 970 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 LSM7Q9UK45 103 aaKnown RBP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 CNTN6Q9UQ52 1028 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 SH3BP1Q9Y3L3 701 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 DAAM1Q9Y4D1 1078 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 PCDHB4Q9Y5E5 795 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 USP3Q9Y6I4 520 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 PCNX2A6NKB5 2137 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 NOTCH2Q04721 2471 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 SPAARA0A1B0GVQ0 90 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 KCNJ18B7U540 433 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 M0QYV0 167 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 TRDMT1O14717 391 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 ATXN7O15265 892 aaPredicted RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 SART1O43290 800 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 MED7O43513 233 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 CAVIN2O95810 425 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 ADH1CP00326 375 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 DRD1P21728 446 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 ATP5C1P36542 298 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 EIF2DP41214 584 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 PXNP49023 591 aaPredicted RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 SIM1P81133 766 aaPredicted RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 TNK2Q07912 1038 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 GRSF1Q12849 480 aaKnown RBP eCLIP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 LRMPQ12912 555 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 CCINQ13939 588 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 KCNJ12Q14500 433 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 NR6A1Q15406 480 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 EML3Q32P44 896 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 PLK5Q496M5 336 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 PREPLQ4J6C6 727 aaPredicted RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 VWA3BQ502W6 1294 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 TMEM196Q5HYL7 178 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 RAB41Q5JT25 222 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 LCLAT1Q6UWP7 414 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 Q6ZS52 159 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 GPRIN1Q7Z2K8 1008 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 RAB44Q7Z6P3 723 aaPredicted RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 PIGZQ86VD9 579 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 TTC30AQ86WT1 665 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 LSM14AQ8ND56 463 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 RIN3Q8TB24 985 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 MDM1Q8TC05 714 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 ENOX1Q8TC92 643 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 KCTD13Q8WZ19 329 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 MED15Q96RN5 788 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 CYP2S1Q96SQ9 504 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 TUBGCP2Q9BSJ2 902 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 NDST4Q9H3R1 872 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 SLC32A1Q9H598 525 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 CCSER2Q9H7U1 834 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 ECT2Q9H8V3 914 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 CNGB3Q9NQW8 809 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 GKN1Q9NS71 199 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 OLA1Q9NTK5 396 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 RBM12Q9NTZ6 932 aaKnown RBP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.34□□□□□ -1.39
SSX4B-202ENST00000619890 CFAP97Q9P2B7 532 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 DNMT3LQ9UJW3 386 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 NAGPAQ9UK23 515 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 ZNF510Q9Y2H8 683 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 NFE2L3Q9Y4A8 694 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 WNT6Q9Y6F9 365 aa6.34□□□□□ -1.39
SSX4B-202ENST00000619890 CCDC163A0A0D9SF12 145 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 A0A1W2PQH9 124 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 TTC24A2A3L6 582 aaPredicted RBP6.33□□□□□ -1.4
SSX4B-202ENST00000619890 BCLAF3A2AJT9 711 aaKnown RBP6.33□□□□□ -1.4
SSX4B-202ENST00000619890 ATG13O75143 517 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 FBXO21O94952 628 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 ZBED1O96006 694 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 CYP17A1P05093 508 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 RARGP13631 454 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 KRT5P13647 590 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 ARSAP15289 507 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 GNA15P30679 374 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 GJA4P35212 333 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 RDXP35241 583 aaKnown RBP6.33□□□□□ -1.4
SSX4B-202ENST00000619890 ACADSBP45954 432 aa6.33□□□□□ -1.4
SSX4B-202ENST00000619890 SOX9P48436 509 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms