RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 PCDHA5Q9Y5H7 936 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 TGFB1I1O43294 461 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 PHACTR2O75167 634 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 DNTTP04053 509 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 RALAP11233 206 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 CCDC130P13994 396 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 ABCB4P21439 1286 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 CORO1AP31146 461 aaKnown RBP10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 KIF11P52732 1056 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 UCNP55089 124 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 SNRPFP62306 86 aaKnown RBP10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 ARID5AQ03989 594 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 ZNF667Q5HYK9 610 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 KIAA0895LQ68EN5 471 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 CCDC73Q6ZRK6 1079 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 BRAPQ7Z569 592 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 SCD5Q86SK9 330 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 UNC93AQ86WB7 457 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 FMNL3Q8IVF7 1028 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 CCDC65Q8IXS2 484 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 EID2Q8N6I1 236 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 DCBLD1Q8N8Z6 715 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 FAM181AQ8N9Y4 354 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 ZNF248Q8NDW4 579 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 ZNF507Q8TCN5 953 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 GOLGA1Q92805 767 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 CDK5RAP1Q96SZ6 601 aaKnown RBP10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 SDCBP2Q9H190 292 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 PNPLA8Q9NP80 782 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 PRSS16Q9NQE7 514 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 AGPAT3Q9NRZ7 376 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 CLIC5Q9NZA1 410 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 NAGPAQ9UK23 515 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 AGO1Q9UL18 857 aaKnown RBP10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 PLA2G4CQ9UP65 541 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 CLCA2Q9UQC9 943 aa10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 COL5A1P20908 1838 aaPredicted RBP10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 MUC22E2RYF6 1773 aaPredicted RBP10.62□□□□□ -0.71
SMCO4P1-201ENST00000592909 EIF3DO15371 548 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 WISP1O95388 367 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 WNT1P04628 370 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 FAM200BP0CF97 657 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 C6P13671 934 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 CKMT2P17540 419 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 GLDCP23378 1020 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 GJB2P29033 226 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 TXLNAP40222 546 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 RXRGP48443 463 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 TMPRSS3P57727 454 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 ZNF699Q32M78 642 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 TTC31Q49AM3 519 aaPredicted RBP10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 CLEC20AQ6ZU45 233 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 USP30Q70CQ3 517 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 CCDC186Q7Z3E2 898 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 FAM217AQ8IXS0 508 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 C12orf29Q8N999 325 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 XXYLT1Q8NBI6 393 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 WFIKKN2Q8TEU8 576 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 DDI1Q8WTU0 396 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 SNRNP27Q8WVK2 155 aaKnown RBP10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 HIC2Q96JB3 615 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 SLC6A18Q96N87 628 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 HNRNPABQ99729 332 aaKnown RBP10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 SEMA4CQ9C0C4 833 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 FBXO2Q9UK22 296 aaPredicted RBP10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 SRPRBQ9Y5M8 271 aaKnown RBP10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 CKAP5Q14008 2032 aa10.61□□□□□ -0.71
SMCO4P1-201ENST00000592909 MGAQ8IWI9 3026 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 A0A1W2PR77 199 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 C10orf142B7Z368 130 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 CD38P28907 300 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 EPHA8P29322 1005 aaPredicted RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 HLA-FP30511 346 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 ARRB1P49407 418 aaPredicted RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 NDST1P52848 882 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 AP3M2P53677 418 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 INSM1Q01101 510 aaPredicted RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 NCOA4Q13772 614 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 FNDC3BQ53EP0 1204 aaKnown RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 BROXQ5VW32 411 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 ZNF776Q68DI1 518 aaPredicted RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 EPM2AIP1Q7L775 607 aaPredicted RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 KIAA0907Q7Z7F0 614 aaPredicted RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 DENND1CQ8IV53 801 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 ZNF366Q8N895 744 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 CYB5D2Q8WUJ1 264 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 TTC9Q92623 222 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 HPS3Q969F9 1004 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 ZNF578Q96N58 590 aaPredicted RBP10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 CLIC6Q96NY7 704 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 LGMNQ99538 433 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 ERVMER34-1Q9H9K5 563 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 EBF2Q9HAK2 575 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 GDF3Q9NR23 364 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 FAM49BQ9NUQ9 324 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 SUN2Q9UH99 717 aa10.6□□□□□ -0.71
SMCO4P1-201ENST00000592909 ADAMTS1Q9UHI8 967 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms