RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CCDC174Q6PII3 467 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 C16orf89Q6UX73 402 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 EGFL6Q8IUX8 553 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 OR1N1Q8NGS0 311 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 PNISRQ8TF01 805 aaKnown RBP3.96□□□□□ -1.78
VMP1-212ENST00000591782 SLC22A17Q8WUG5 538 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 OVCA2Q8WZ82 227 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 C5orf34Q96MH7 638 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 RMDN3Q96TC7 470 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 ARPC5LQ9BPX5 153 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 ADGRE3Q9BY15 652 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 TMX4Q9H1E5 349 aaPredicted RBP3.96□□□□□ -1.78
VMP1-212ENST00000591782 TP63Q9H3D4 680 aaPredicted RBP3.96□□□□□ -1.78
VMP1-212ENST00000591782 ADARB2Q9NS39 739 aaKnown RBP3.96□□□□□ -1.78
VMP1-212ENST00000591782 RXFP3Q9NSD7 469 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 ABHD10Q9NUJ1 306 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 LRFN1Q9P244 771 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 SEMA5BQ9P283 1151 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 FRMD4BQ9Y2L6 1034 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 SETD1BQ9UPS6 1966 aaKnown RBP3.96□□□□□ -1.78
VMP1-212ENST00000591782 GXYLT2A0PJZ3 443 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 CGB1A6NKQ9 187 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 CCER2I3L3R5 266 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 ACKR2O00590 384 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 SH3BP5O60239 455 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 RPP40O75818 363 aaKnown RBP3.95□□□□□ -1.78
VMP1-212ENST00000591782 CSTBP04080 98 aaKnown RBP3.95□□□□□ -1.78
VMP1-212ENST00000591782 TPM2P07951 284 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 GYS1P13807 737 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 FBLP22087 321 aaKnown RBP3.95□□□□□ -1.78
VMP1-212ENST00000591782 MPGP29372 298 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 SERPINF1P36955 418 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 BLMHQ13867 455 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 ZKSCAN8Q15776 578 aaPredicted RBP3.95□□□□□ -1.78
VMP1-212ENST00000591782 CCDC38Q502W7 563 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 FAM83BQ5T0W9 1011 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 TMEM63BQ5T3F8 832 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 LIN54Q6MZP7 749 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 ACSM6Q6P461 480 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 VSTM1Q6UX27 236 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 RANBP10Q6VN20 620 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 NRSN1Q8IZ57 195 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 C8orf58Q8NAV2 365 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 SNRNP27Q8WVK2 155 aaKnown RBP3.95□□□□□ -1.78
VMP1-212ENST00000591782 NPIPB3Q92617 1050 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 HIC2Q96JB3 615 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 TSPAN18Q96SJ8 248 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 PAAF1Q9BRP4 392 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 EFHD1Q9BUP0 239 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 KATNAL1Q9BW62 490 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 PTPRHQ9HD43 1115 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 FBXO28Q9NVF7 368 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 DACT1Q9NYF0 836 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 PCDHB7Q9Y5E2 793 aa3.95□□□□□ -1.78
VMP1-212ENST00000591782 C16orf96A6NNT2 1141 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 M0QYT0 321 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 OVOL3O00110 214 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 NEFHP12036 1026 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 MATN1P21941 496 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 DUSP1P28562 367 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 C21orf58P58505 322 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 GAB1Q13480 694 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 KPNB1Q14974 876 aaKnown RBP3.94□□□□□ -1.78
VMP1-212ENST00000591782 KRT72Q14CN4 511 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 SEC23BQ15437 767 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 BTBD16Q32M84 506 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 CEP78Q5JTW2 689 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 TRABD2AQ86V40 505 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 CACNA2D3Q8IZS8 1091 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 OR52L2PQ8NGH6 319 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 WDR60Q8WVS4 1066 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 GLMPQ8WWB7 406 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 AKAP1Q92667 903 aaKnown RBP eCLIP3.94□□□□□ -1.78
VMP1-212ENST00000591782 EID2BQ96D98 161 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 SH2D3AQ9BRG2 576 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 ELOVL1Q9BW60 279 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 CDCP1Q9H5V8 836 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 PDGFCQ9NRA1 345 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 FLRT1Q9NZU1 646 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 GRHPRQ9UBQ7 328 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 UBE2J1Q9Y385 318 aaPredicted RBP3.94□□□□□ -1.78
VMP1-212ENST00000591782 PCSK5Q92824 1860 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 SPATA31A1Q5TZJ5 1347 aa3.94□□□□□ -1.78
VMP1-212ENST00000591782 ZCCHC6Q5VYS8 1495 aaKnown RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 LOC105369274A0A096LPK9 316 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 LOC102723532A0A0G2JNH3 316 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 KIF28PB7ZC32 967 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 PRYO14603 147 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 CELA2AP08217 269 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 ITGA2BP08514 1039 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 PEPDP12955 493 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 EPHB2P29323 1055 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 THBS4P35443 961 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 COPB2P35606 906 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 CHKAP35790 457 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 VPS41P49754 854 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 AGTR2P50052 363 aa3.93□□□□□ -1.78
VMP1-212ENST00000591782 MAP2K1Q02750 393 aaPredicted RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 SRSF4Q08170 494 aaKnown RBP3.93□□□□□ -1.78
VMP1-212ENST00000591782 FOXF2Q12947 444 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms