RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 C8orf48Q96LL4 319 aa4.14□□□□□ -1.75
TPM4-214ENST00000591645 CDCP1Q9H5V8 836 aa4.14□□□□□ -1.75
TPM4-214ENST00000591645 PAPOLBQ9NRJ5 636 aaKnown RBP4.14□□□□□ -1.75
TPM4-214ENST00000591645 TMEM45AQ9NWC5 275 aa4.14□□□□□ -1.75
TPM4-214ENST00000591645 ASNSD1Q9NWL6 643 aa4.14□□□□□ -1.75
TPM4-214ENST00000591645 PCDHB2Q9Y5E7 798 aa4.14□□□□□ -1.75
TPM4-214ENST00000591645 ZNF335Q9H4Z2 1342 aaPredicted RBP4.14□□□□□ -1.75
TPM4-214ENST00000591645 CCDC187A0A096LP49 1063 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 GXYLT2A0PJZ3 443 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 CD8B2A6NJW9 211 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 DHHO43323 396 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 VIPP01282 170 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 SLC3A2P08195 630 aaKnown RBP4.13□□□□□ -1.75
TPM4-214ENST00000591645 FGF2P09038 288 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 TRIM27P14373 513 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 SOX2P48431 317 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 NSUN2Q08J23 767 aaKnown RBP eCLIP4.13□□□□□ -1.75
TPM4-214ENST00000591645 SEMA3BQ13214 749 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 GAB1Q13480 694 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 HLTFQ14527 1009 aaKnown RBP eCLIP4.13□□□□□ -1.75
TPM4-214ENST00000591645 GLE1Q53GS7 698 aaKnown RBP4.13□□□□□ -1.75
TPM4-214ENST00000591645 RAP1GAP2Q684P5 730 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 CCDC144NLQ6NUI1 221 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 ACSM6Q6P461 480 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 LAS2Q8IYD9 372 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 BRI3BPQ8WY22 251 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 CELF1Q92879 486 aaKnown RBP4.13□□□□□ -1.75
TPM4-214ENST00000591645 MARK4Q96L34 752 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 TUBB6Q9BUF5 446 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 PCDHAC1Q9H158 963 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 ZMYND8Q9ULU4 1186 aaPredicted RBP4.13□□□□□ -1.75
TPM4-214ENST00000591645 CA14Q9ULX7 337 aa4.13□□□□□ -1.75
TPM4-214ENST00000591645 HEMK1Q9Y5R4 338 aaPredicted RBP4.13□□□□□ -1.75
TPM4-214ENST00000591645 B4DGG1 531 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 ZSCAN9O15535 394 aaPredicted RBP4.12□□□□□ -1.75
TPM4-214ENST00000591645 YY1P25490 414 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 VPS41P49754 854 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 DMWDQ09019 674 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 MTA1Q13330 715 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 BFSP2Q13515 415 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 SAFBQ15424 915 aaKnown RBP eCLIP4.12□□□□□ -1.75
TPM4-214ENST00000591645 MAPKAPK3Q16644 382 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 KYAT3Q6YP21 454 aaKnown RBP4.12□□□□□ -1.75
TPM4-214ENST00000591645 COLCA1Q6ZS62 124 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 PIK3AP1Q6ZUJ8 805 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 C11orf96Q7Z7L8 435 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 SLC44A5Q8NCS7 719 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 ZFPM2Q8WW38 1151 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 PMM1Q92871 262 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 SCNM1Q9BWG6 230 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 TTLL2Q9BWV7 592 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 FAM234AQ9H0X4 552 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 MOV10Q9HCE1 1003 aaKnown RBP4.12□□□□□ -1.75
TPM4-214ENST00000591645 RGL1Q9NZL6 768 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 AGO2Q9UKV8 859 aaKnown RBP4.12□□□□□ -1.75
TPM4-214ENST00000591645 VPS4AQ9UN37 437 aa4.12□□□□□ -1.75
TPM4-214ENST00000591645 TRBV5-3A0A0A0MS03 114 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 IGLV5-39A0A0G2JS06 123 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 FAM90A8PA6NJQ4 464 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 ZNF814B7Z6K7 855 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 H3BNX3 289 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 KIF3BO15066 747 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 CTIFO43310 598 aaKnown RBP4.11□□□□□ -1.75
TPM4-214ENST00000591645 CRYABP02511 175 aaKnown RBP4.11□□□□□ -1.75
TPM4-214ENST00000591645 FAM90A13PP0C7W8 464 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 FAM90A24PP0C7X0 464 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 ST6GAL1P15907 406 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 CCKARP32238 428 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 CCKBRP32239 447 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 SLC8A1P32418 973 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 GSTM5P46439 218 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 TM4SF4P48230 202 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 THBS3P49746 956 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 COBLL1Q53SF7 1204 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 CCDC181Q5TID7 509 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 DPP9Q86TI2 863 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 GRAMD1AQ96CP6 724 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 PAAF1Q9BRP4 392 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 KCNK9Q9NPC2 374 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 GJB4Q9NTQ9 266 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 PCDHA12Q9UN75 941 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 MAN2B2Q9Y2E5 1009 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 UBE2J1Q9Y385 318 aaPredicted RBP4.11□□□□□ -1.75
TPM4-214ENST00000591645 SQORQ9Y6N5 450 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 EMSYQ7Z589 1322 aa4.11□□□□□ -1.75
TPM4-214ENST00000591645 A0A0G2JK05 382 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 KIR2DS5A0A0G2JLQ3 304 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 ANO9A1A5B4 782 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 KIR2DS3K7RE56 304 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 PMM2O15305 246 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 PRPF4O43172 522 aaKnown RBP eCLIP4.1□□□□□ -1.75
TPM4-214ENST00000591645 FGF18O76093 207 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 NDST3O95803 873 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 ENO1P06733 434 aaKnown RBP4.1□□□□□ -1.75
TPM4-214ENST00000591645 PECAM1P16284 738 aaPredicted RBP4.1□□□□□ -1.75
TPM4-214ENST00000591645 TKTP29401 623 aaKnown RBP4.1□□□□□ -1.75
TPM4-214ENST00000591645 IL6STP40189 918 aaPredicted RBP4.1□□□□□ -1.75
TPM4-214ENST00000591645 STAT6P42226 847 aa4.1□□□□□ -1.75
TPM4-214ENST00000591645 ALDH7A1P49419 539 aaKnown RBP4.1□□□□□ -1.75
TPM4-214ENST00000591645 PMS2P11Q13670 270 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms