RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 IRF2BP2Q7Z5L9 587 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 TECPR1Q7Z6L1 1165 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 RASGRP3Q8IV61 690 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.56□□□□□ -1.52
UBR1-205ENST00000564540 OR52L2PQ8NGH6 319 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 OVCA2Q8WZ82 227 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 CELF1Q92879 486 aaKnown RBP5.56□□□□□ -1.52
UBR1-205ENST00000564540 RNF26Q9BY78 433 aaPredicted RBP5.56□□□□□ -1.52
UBR1-205ENST00000564540 CDCP1Q9H5V8 836 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 EPS8L2Q9H6S3 715 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 RXFP3Q9NSD7 469 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 HEY2Q9UBP5 337 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 CEP83Q9Y592 693 aa5.56□□□□□ -1.52
UBR1-205ENST00000564540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.55□□□□□ -1.52
UBR1-205ENST00000564540 CNOT3O75175 753 aaKnown RBP5.55□□□□□ -1.52
UBR1-205ENST00000564540 STAT6P42226 847 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 RAB30Q15771 203 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 ZNF260Q3ZCT1 412 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 EARS2Q5JPH6 523 aaKnown RBP5.55□□□□□ -1.52
UBR1-205ENST00000564540 KRT27Q7Z3Y8 459 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 RFX6Q8HWS3 928 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 IPO4Q8TEX9 1081 aaKnown RBP5.55□□□□□ -1.52
UBR1-205ENST00000564540 P2RY11Q96G91 374 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 NUDT22Q9BRQ3 303 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 ELOVL1Q9BW60 279 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 FOXP1Q9H334 677 aaPredicted RBP5.55□□□□□ -1.52
UBR1-205ENST00000564540 DTNAQ9Y4J8 743 aa5.55□□□□□ -1.52
UBR1-205ENST00000564540 PNMA6EA0A0J9YXQ4 647 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 TTC34A8MYJ7 566 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 PCDH17O14917 1159 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 NPC1O15118 1278 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 TAF5LO75529 589 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 CD63P08962 238 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 ABCB4P21439 1286 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 RPS6KB1P23443 525 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 ZNF84P51523 738 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 LAMB3Q13751 1172 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 KRTAP5-11Q6L8G4 156 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 ZNF793Q6ZN11 406 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 UBE2Q1Q7Z7E8 422 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 SRLQ86TD4 932 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 C9orf106Q8NAJ2 232 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 ZNF548Q8NEK5 533 aaPredicted RBP5.54□□□□□ -1.52
UBR1-205ENST00000564540 GLMPQ8WWB7 406 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 GJA10Q969M2 543 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 MCRS1Q96EZ8 462 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 SGCZQ96LD1 299 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 MYD88Q99836 296 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 SENP7Q9BQF6 1050 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 NECTIN3Q9NQS3 549 aa5.54□□□□□ -1.52
UBR1-205ENST00000564540 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.54□□□□□ -1.52
UBR1-205ENST00000564540 ITGA5P08648 1049 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 SLC8A1P32418 973 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 SOX2P48431 317 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 CCT4P50991 539 aaKnown RBP5.53□□□□□ -1.52
UBR1-205ENST00000564540 MTX1Q13505 466 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 GRM4Q14833 912 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 ASB12Q8WXK4 309 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 NPIPB3Q92617 1050 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 TMEM45AQ9NWC5 275 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 SLC39A10Q9ULF5 831 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 PCDHB7Q9Y5E2 793 aa5.53□□□□□ -1.52
UBR1-205ENST00000564540 TTBK1Q5TCY1 1321 aaPredicted RBP5.52□□□□□ -1.53
UBR1-205ENST00000564540 HNRNPDLO14979 420 aaKnown RBP5.52□□□□□ -1.53
UBR1-205ENST00000564540 PLA2G6O60733 806 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 TMEM191BP0C7N4 346 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 SRSF1Q07955 248 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBR1-205ENST00000564540 DMWDQ09019 674 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 CSHL1Q14406 222 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 CCDC181Q5TID7 509 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 FAM57BQ71RH2 274 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 RHPN2Q8IUC4 686 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 LAS2Q8IYD9 372 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 SLC22A17Q8WUG5 538 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 ZNF845Q96IR2 970 aaPredicted RBP5.52□□□□□ -1.53
UBR1-205ENST00000564540 ZFYVE19Q96K21 471 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 TNIP3Q96KP6 325 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 TTLL2Q9BWV7 592 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 MOV10Q9HCE1 1003 aaKnown RBP5.52□□□□□ -1.53
UBR1-205ENST00000564540 HELLSQ9NRZ9 838 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 TM7SF3Q9NS93 570 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 FBXO28Q9NVF7 368 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 IGSF9Q9P2J2 1179 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 CA14Q9ULX7 337 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 B3GNT3Q9Y2A9 372 aa5.52□□□□□ -1.53
UBR1-205ENST00000564540 GXYLT2A0PJZ3 443 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 M0QYT0 321 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 PIP5K1BO14986 540 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 KAT7O95251 611 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 NTN1O95631 604 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 NTSR2O95665 410 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 CER1O95813 267 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 PEPDP12955 493 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 ME1P48163 572 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
UBR1-205ENST00000564540 MAP9Q49MG5 647 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 DHRS13Q6UX07 377 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 UEVLDQ8IX04 471 aa5.51□□□□□ -1.53
UBR1-205ENST00000564540 DEPTORQ8TB45 409 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms