RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PCDHB5Q9Y5E4 795 aa5.68□□□□□ -1.5
HERC1-213ENST00000561359 CCDC169A6NNP5 214 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 H3BRJ5 948 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 XPOTO43592 962 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 DFNA5O60443 496 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ICMTO60725 284 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 TULP3O75386 442 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 MT-CO3P00414 261 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 FAM87AP0C7U9 286 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 CXCL8P10145 99 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SFTPCP11686 197 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 XRCC6P12956 609 aaKnown RBP eCLIP5.67□□□□□ -1.5
HERC1-213ENST00000561359 GCFC2P16383 781 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 POU3F2P20265 443 aaPredicted RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 OXTRP30559 389 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 GRIA4P48058 902 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SERPINB4P48594 390 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ARL4DP49703 201 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 TPMTP51580 245 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 GUCY2FP51841 1108 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 RCAN1P53805 252 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 C21orf59P57076 290 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 LILRA4P59901 499 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ERVPABLB-1P60509 514 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 RPL10AP62906 217 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 ZXDBP98169 803 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 GAD2Q05329 585 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 PDE4CQ08493 712 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ILKQ13418 452 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 STARD3Q14849 445 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 IGFBP7Q16270 282 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ANO4Q32M45 955 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SLC10A6Q3KNW5 377 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ZSCAN23Q3MJ62 389 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 FOXD4L6Q3SYB3 417 aaPredicted RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 SEZ6Q53EL9 994 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 KCNT1Q5JUK3 1230 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 PRAMEF14Q5SWL7 426 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 CREB3L3Q68CJ9 461 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 MPZL3Q6UWV2 235 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ADAMTSL4Q6UY14 1074 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 FOXD4L3Q6VB84 417 aaPredicted RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 NEK8Q86SG6 692 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 FAM124AQ86V42 546 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SLFN12Q8IYM2 578 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 BLIDQ8IZY5 108 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 EID2Q8N6I1 236 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 DCBLD1Q8N8Z6 715 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 TERB1Q8NA31 727 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SCFD1Q8WVM8 642 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 TRMT2BQ96GJ1 504 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 VCPIP1Q96JH7 1222 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 MMS19Q96T76 1030 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 GABRG3Q99928 467 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 NUP58Q9BVL2 599 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 TARS2Q9BW92 718 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 MRPL4Q9BYD3 311 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 ADAM19Q9H013 955 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 CD248Q9HCU0 757 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 PTPRHQ9HD43 1115 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 TM9SF3Q9HD45 589 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SH3GLB2Q9NR46 395 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SMPD4Q9NXE4 827 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 USP36Q9P275 1121 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 CFAP97Q9P2B7 532 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 PLEKHB1Q9UF11 243 aaPredicted RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 EGFL7Q9UHF1 273 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 ADAMTS1Q9UHI8 967 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 DSEQ9UL01 958 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 UBQLN1Q9UMX0 589 aaKnown RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 PCDHB1Q9Y5F3 818 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 SLCO1B1Q9Y6L6 691 aa5.67□□□□□ -1.5
HERC1-213ENST00000561359 RP1L1Q8IWN7 2480 aaPredicted RBP5.67□□□□□ -1.5
HERC1-213ENST00000561359 A0A1B0GTQ1 180 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CLEC18AA5D8T8 446 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ARHGEF35A5YM69 484 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 KCNJ18B7U540 433 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 WASH3PC4AMC7 463 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 PPEF2O14830 753 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 TRIM24O15164 1050 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 PAPSS1O43252 624 aaPredicted RBP5.66□□□□□ -1.5
HERC1-213ENST00000561359 USP12O75317 370 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 NOL4O94818 638 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CYP11A1P05108 521 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ACADMP11310 421 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ITGB6P18564 788 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CYP11B2P19099 503 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CYP2F1P24903 491 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ELAVL4P26378 380 aaKnown RBP5.66□□□□□ -1.5
HERC1-213ENST00000561359 GRIK1P39086 918 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CTSKP43235 329 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 LSSP48449 732 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 INHBCP55103 352 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 TSPY1Q01534 308 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 NUCB1Q02818 461 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ORC1Q13415 861 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 NOLC1Q14978 699 aaKnown RBP eCLIP5.66□□□□□ -1.5
HERC1-213ENST00000561359 SAFBQ15424 915 aaKnown RBP eCLIP5.66□□□□□ -1.5
HERC1-213ENST00000561359 LINC00303Q3SY05 128 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 FUT11Q495W5 492 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms