RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 PROCP04070 461 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 GPD1P21695 349 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 ASPAP45381 313 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 KLHL38Q2WGJ6 581 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 DCAF6Q58WW2 860 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 PPIL6Q8IXY8 311 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 AZIN2Q96A70 460 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 PRM3Q9NNZ6 103 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 TMPRSS4Q9NRS4 437 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 ABLIM1O14639 778 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 MYCP01106 439 aaPredicted RBP12.53□□□□□ -0.4
SEC11A-206ENST00000558924 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
SEC11A-206ENST00000558924 PGGT1BP53609 377 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 SURF1Q15526 300 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 SPDYCQ5MJ68 293 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 HASPINQ8TF76 798 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 MRPL45Q9BRJ2 306 aaKnown RBP12.53□□□□□ -0.4
SEC11A-206ENST00000558924 TMEM109Q9BVC6 243 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 MAF1Q9H063 256 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 SNX25Q9H3E2 840 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 DDX56Q9NY93 547 aaKnown RBP12.53□□□□□ -0.4
SEC11A-206ENST00000558924 SIX4Q9UIU6 781 aa12.53□□□□□ -0.4
SEC11A-206ENST00000558924 TCRBV9S1A1TA0A576 114 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 GSTA2P09210 222 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 AP2B1P63010 937 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 LSAMPQ13449 338 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 CA9Q16790 459 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 CDHR3Q6ZTQ4 885 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 SYDE1Q6ZW31 735 aaPredicted RBP12.52□□□□□ -0.4
SEC11A-206ENST00000558924 GPC2Q8N158 579 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 SLC4A11Q8NBS3 891 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 CPT1BQ92523 772 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 ANGPTL2Q9UKU9 493 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 MT-CO1P00395 513 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 ITGA2BP08514 1039 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 MYL3P08590 195 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 CYP2B6P20813 491 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.4
SEC11A-206ENST00000558924 BEX3Q00994 111 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 USP13Q92995 863 aaPredicted RBP12.52□□□□□ -0.4
SEC11A-206ENST00000558924 MARK4Q96L34 752 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 NIFKQ9BYG3 293 aaKnown RBP12.52□□□□□ -0.4
SEC11A-206ENST00000558924 PRMT7Q9NVM4 692 aaPredicted RBP12.52□□□□□ -0.4
SEC11A-206ENST00000558924 UBP1Q9NZI7 540 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 DNAJC16Q9Y2G8 782 aa12.52□□□□□ -0.4
SEC11A-206ENST00000558924 MCM3APO60318 1980 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 FOCADQ5VW36 1801 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 E7ENQ6 273 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 CLDN5O00501 218 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 SERPINB5P36952 375 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 RBP5P82980 135 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 CBX3Q13185 183 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 STX3Q13277 289 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 KLF1Q13351 362 aaPredicted RBP12.52□□□□□ -0.41
SEC11A-206ENST00000558924 HIC1Q14526 733 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 MORF4L2Q15014 288 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 WASHC2DQ5SRD0 308 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 PMF1Q6P1K2 205 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 PYROXD2Q8N2H3 581 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 DNAJB3Q8WWF6 145 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 CNBD2Q96M20 576 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
SEC11A-206ENST00000558924 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 ANKRD12Q6UB98 2062 aa12.52□□□□□ -0.41
SEC11A-206ENST00000558924 CCL15-CCL14A0A0B4J2E2 113 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 VAV1P15498 845 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CDK16Q00536 496 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 MOGSQ13724 837 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CCL15Q16663 113 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 LGSNQ5TDP6 509 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 HSPBAP1Q96EW2 488 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 PPM1HQ9ULR3 514 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 PLA2G4CQ9UP65 541 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 APOBEC2Q9Y235 224 aaKnown RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CLUHO75153 1309 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 A0A0J9YVX5 310 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 KCNK1O00180 336 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 TPD52L2O43399 206 aaKnown RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 TGFB3P10600 412 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 GRIA1P42261 906 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 ANKRD23Q86SG2 305 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 TNS4Q8IZW8 715 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 USP33Q8TEY7 942 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 VCPIP1Q96JH7 1222 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 SIK2Q9H0K1 926 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 GOLGA4Q13439 2230 aaKnown RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CXorf49A8MYA2 514 aaPredicted RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CACNB2Q08289 660 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms