RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 KCNE5Q9UJ90 142 aa3.46□□□□□ -1.86
TRAV28-201ENST00000557548 PCDHGB4Q9UN71 923 aa3.46□□□□□ -1.86
TRAV28-201ENST00000557548 SMG5Q9UPR3 1016 aaKnown RBP3.46□□□□□ -1.86
TRAV28-201ENST00000557548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.46□□□□□ -1.86
TRAV28-201ENST00000557548 hCG_1807616A0A1W2PRN6 198 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TSPY2A6NKD2 308 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CAPN14A8MX76 684 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TSPAN4O14817 238 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 NKX2-8O15522 239 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 HNRNPRO43390 633 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 DHX16O60231 1041 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 RPS6KA4O75676 772 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 GJB3O75712 270 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 RAD17O75943 681 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 KRT1P04264 644 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 C1QTNF9P0C862 333 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TSPY3P0CV98 308 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TSPY8P0CW00 308 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 UBL4AP11441 157 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CD19P15391 556 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CHN1P15882 459 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 PORP16435 677 aaPredicted RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 GRK5P34947 590 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 RCAN1P53805 252 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 EPHB4P54760 987 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 LINC00310P59036 64 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TAS2R50P59544 299 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 RPS3AP61247 264 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 RPL15P61313 204 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CXADRP78310 365 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TSPY1Q01534 308 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 MC1RQ01726 317 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 EIF2B5Q13144 721 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 MAMLD1Q13495 774 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CAMK1Q14012 370 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 KCNJ12Q14500 433 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 WTAPQ15007 396 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TBCCQ15814 346 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TBC1D10BQ4KMP7 808 aaPredicted RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 UBXN11Q5T124 520 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 NT5DC1Q5TFE4 455 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 B3GNTL1Q67FW5 361 aaPredicted RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 DENND1BQ6P3S1 775 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 C16orf89Q6UX73 402 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 KIAA1324Q6UXG2 1013 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CAND1Q86VP6 1230 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 GSPT2Q8IYD1 628 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 FUKQ8N0W3 1084 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 LGI4Q8N135 537 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 ADSSL1Q8N142 457 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CLEC4CQ8WTT0 213 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 OVCA2Q8WZ82 227 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 NELL1Q92832 810 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 GLG1Q92896 1179 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 NSUN4Q96CB9 384 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 KIF1BPQ96EK5 621 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 FAR2Q96K12 515 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 MNTQ99583 582 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 SLF1Q9BQI6 1058 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TPSD1Q9BZJ3 242 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 AMBRA1Q9C0C7 1298 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 INTS2Q9H0H0 1204 aaKnown RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 KCNK9Q9NPC2 374 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 DIAPH3Q9NSV4 1193 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TRPM5Q9NZQ8 1165 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 TBC1D14Q9P2M4 693 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 NFKBIL1Q9UBC1 381 aaPredicted RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 NKX1-2Q9UD57 310 aaPredicted RBP3.45□□□□□ -1.86
TRAV28-201ENST00000557548 SUFUQ9UMX1 484 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 SLC12A4Q9UP95 1085 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CHST2Q9Y4C5 530 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 PCDHB2Q9Y5E7 798 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 PSAT1Q9Y617 370 aa3.45□□□□□ -1.86
TRAV28-201ENST00000557548 CCDC187A0A096LP49 1063 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 A0A0G2JLL6 359 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 FAM90A7PA6NKC0 464 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SH2D7A6NKC9 451 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 FAM90A22PA8MWA6 464 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 FAM90A12PA8MX19 464 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 FAM90A23PA8MXZ1 464 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 DIRC3C9JPN6 131 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 GRM8O00222 908 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 LAMTOR5O43504 91 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 TNFSF14O43557 240 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 CA12O43570 354 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 TULP3O75386 442 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 LYL1P12980 280 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 LAMP2P13473 410 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 PPP3CBP16298 524 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 GATA3P23771 443 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 PCP4P48539 62 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 CLCN2P51788 898 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 DGKQP52824 942 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 CDH15P55291 814 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SNX16P57768 344 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 NLRP5P59047 1200 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ZBED6P86452 979 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 CREB5Q02930 508 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 TBL3Q12788 808 aaKnown RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 PTP4A2Q12974 167 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms