RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 APOL1O14791 398 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 SYF2O95926 243 aaKnown RBP4.62□□□□□ -1.67
SCFD1-210ENST00000553693 FAM90A13PP0C7W8 464 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 FAM90A24PP0C7X0 464 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 ST6GAL1P15907 406 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 CCKBRP32239 447 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 SLC8A1P32418 973 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 HOXD12P35452 270 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 IDUAP35475 653 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 STT3AP46977 705 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 ALDH7A1P49419 539 aaKnown RBP4.62□□□□□ -1.67
SCFD1-210ENST00000553693 ATP1A4Q13733 1029 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 MANEAQ5SRI9 462 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 SLC44A5Q8NCS7 719 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 ZNF845Q96IR2 970 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-210ENST00000553693 SNX27Q96L92 541 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 NUDT22Q9BRQ3 303 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 TTLL2Q9BWV7 592 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 CDCP1Q9H5V8 836 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 DECR2Q9NUI1 292 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 SPATA31A5Q5VU36 1347 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 SPATA31A7Q8IWB4 1347 aa4.62□□□□□ -1.67
SCFD1-210ENST00000553693 OR2W5A6NFC9 320 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 TLX3O43711 291 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-210ENST00000553693 VIPP01282 170 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 CCKARP32238 428 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 THBS3P49746 956 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 CBFBQ13951 182 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 SLC5A9Q2M3M2 681 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 MIDNQ504T8 468 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 CCDC144NLQ6NUI1 221 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 RFX6Q8HWS3 928 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 RNF152Q8N8N0 203 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 GLMPQ8WWB7 406 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 WASF1Q92558 559 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 CELF1Q92879 486 aaKnown RBP4.61□□□□□ -1.67
SCFD1-210ENST00000553693 LYZL4Q96KX0 146 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 KRTAP4-4Q9BYR3 166 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 PCDHAC1Q9H158 963 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 MOV10Q9HCE1 1003 aaKnown RBP4.61□□□□□ -1.67
SCFD1-210ENST00000553693 MLXIPLQ9NP71 852 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 STARD7Q9NQZ5 370 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 IPO11Q9UI26 975 aaKnown RBP4.61□□□□□ -1.67
SCFD1-210ENST00000553693 ZNF580Q9UK33 172 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 EMSYQ7Z589 1322 aa4.61□□□□□ -1.67
SCFD1-210ENST00000553693 CCDC187A0A096LP49 1063 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 PRPF4O43172 522 aaKnown RBP eCLIP4.6□□□□□ -1.67
SCFD1-210ENST00000553693 SGPL1O95470 568 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 ALPLP05186 524 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 AKR1A1P14550 325 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 EGR1P18146 543 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 PRIM2P49643 509 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 NSUN2Q08J23 767 aaKnown RBP eCLIP4.6□□□□□ -1.67
SCFD1-210ENST00000553693 ELF2Q15723 593 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 P3H1Q32P28 736 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 RUSC1-AS1Q66K80 236 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 ACSM6Q6P461 480 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 KYAT3Q6YP21 454 aaKnown RBP4.6□□□□□ -1.67
SCFD1-210ENST00000553693 KIAA0408Q6ZU52 694 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 TTC30AQ86WT1 665 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 ADGRF4Q8IZF3 695 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 ASB12Q8WXK4 309 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 GJA10Q969M2 543 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 HTATIP2Q9BUP3 242 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 GATA5Q9BWX5 397 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-210ENST00000553693 TMEM8AQ9HCN3 771 aa4.6□□□□□ -1.67
SCFD1-210ENST00000553693 AGO2Q9UKV8 859 aaKnown RBP4.6□□□□□ -1.67
SCFD1-210ENST00000553693 ZMYND8Q9ULU4 1186 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-210ENST00000553693 CTIFO43310 598 aaKnown RBP4.59□□□□□ -1.67
SCFD1-210ENST00000553693 ZC3H11AO75152 810 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCFD1-210ENST00000553693 ENO1P06733 434 aaKnown RBP4.59□□□□□ -1.67
SCFD1-210ENST00000553693 SLC5A1P13866 664 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 TNFRSF1BP20333 461 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 TBXAS1P24557 533 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-210ENST00000553693 GABRB3P28472 473 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 SOX2P48431 317 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 HTR6P50406 440 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 TTC3P53804 2025 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 DMWDQ09019 674 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 GAB1Q13480 694 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 SEMA3AQ14563 771 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 DLGAP5Q15398 846 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 SAFBQ15424 915 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCFD1-210ENST00000553693 KLHL22Q53GT1 634 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 KIAA1161Q6NSJ0 714 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 RFX8Q6ZV50 586 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 B4GALNT4Q76KP1 1039 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 TRAPPC11Q7Z392 1133 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 KRT27Q7Z3Y8 459 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 LAS2Q8IYD9 372 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 ZFPM2Q8WW38 1151 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 SLC25A28Q96A46 364 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 SARGQ9BW04 601 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 FBXO28Q9NVF7 368 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 CA14Q9ULX7 337 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 FAM50BQ9Y247 325 aa4.59□□□□□ -1.67
SCFD1-210ENST00000553693 UBE2J1Q9Y385 318 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-210ENST00000553693 TRBV5-3A0A0A0MS03 114 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 UGDHO60701 494 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms