RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 CAMK2GQ13555 558 aaPredicted RBP22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 ZNF394Q53GI3 561 aa22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 SERPINA13PQ6UXR4 307 aa22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 TMEM245Q9H330 911 aa22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 ANKRD6Q9Y2G4 727 aa22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.67■■□□□ 1.22
SMARCD1-212ENST00000551966 FAM149AA5PLN7 773 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 CYBBP04839 570 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 PDIA4P13667 645 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 AFF3P51826 1226 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 SUZ12Q15022 739 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 FOXD4L6Q3SYB3 417 aaPredicted RBP22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 RAB41Q5JT25 222 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 KCNT1Q5JUK3 1230 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 FOXD4L5Q5VV16 416 aaPredicted RBP22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 FOXD4L3Q6VB84 417 aaPredicted RBP22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 ZNF366Q8N895 744 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 FOXD4L4Q8WXT5 416 aaPredicted RBP22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 SNX19Q92543 992 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 PAGE5Q96GU1 130 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 UBXN6Q9BZV1 441 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 TM9SF3Q9HD45 589 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 FAM13BQ9NYF5 915 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 NUMA1Q14980 2115 aa22.66■■□□□ 1.22
SMARCD1-212ENST00000551966 IGSF10Q6WRI0 2623 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 ACTN4O43707 911 aaKnown RBP22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 SLFN14P0C7P3 912 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 TRIM49P0CI25 452 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 TRIM49CP0CI26 452 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 HLA-FP30511 346 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 E2F5Q15329 346 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 PTPRNQ16849 979 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 LAYNQ6UX15 382 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 CYB5D2Q8WUJ1 264 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 NDRG1Q92597 394 aaKnown RBP22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 BIRC7Q96CA5 298 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 CRELD1Q96HD1 420 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 HEXIM2Q96MH2 286 aaKnown RBP22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 NIF3L1Q9GZT8 377 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 LHX5Q9H2C1 402 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 OSGEPQ9NPF4 335 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 EXOC1Q9NV70 894 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 TRAF3IP3Q9Y228 551 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 FRMD4BQ9Y2L6 1034 aa22.65■■□□□ 1.22
SMARCD1-212ENST00000551966 TMEM131Q92545 1883 aa22.64■■□□□ 1.22
SMARCD1-212ENST00000551966 APC2O95996 2303 aa22.64■■□□□ 1.22
SMARCD1-212ENST00000551966 TNFSF14O43557 240 aa22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 TSPAN3O60637 253 aa22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 HOXD9P28356 352 aaPredicted RBP22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 YWHAGP61981 247 aaKnown RBP eCLIP22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 TRIP4Q15650 581 aaPredicted RBP22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 ADIPOR2Q86V24 386 aa22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 PIGZQ86VD9 579 aa22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 GALNT15Q8N3T1 639 aa22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 ARID3AQ99856 593 aa22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 ORAI3Q9BRQ5 295 aa22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 URB1O60287 2271 aaKnown RBP22.64■■□□□ 1.21
SMARCD1-212ENST00000551966 KNL1Q8NG31 2342 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 H0Y8X5 98 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 MAPK13O15264 365 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 ME1P48163 572 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 RPS14P62263 151 aaKnown RBP22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 SMAD1Q15797 465 aaKnown RBP22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 MPPE1Q53F39 396 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 PM20D1Q6GTS8 502 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 RSRC2Q7L4I2 434 aaKnown RBP22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 BHLHA9Q7RTU4 235 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 KIAA0907Q7Z7F0 614 aaPredicted RBP22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 ZC3H3Q8IXZ2 948 aaKnown RBP22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 CEP57L1Q8IYX8 460 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 SLC4A11Q8NBS3 891 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 PLD4Q96BZ4 506 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 IMPG2Q9BZV3 1241 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 PRSS16Q9NQE7 514 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 STRIP2Q9ULQ0 834 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 SMG1Q96Q15 3661 aaKnown RBP22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 ACACAQ13085 2346 aa22.63■■□□□ 1.21
SMARCD1-212ENST00000551966 A0A087WV48 116 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 GRIA4P48058 902 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 ARID5AQ03989 594 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 SCUBE3Q8IX30 993 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 ARHGAP18Q8N392 663 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 SEMA4DQ92854 862 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 IGSF8Q969P0 613 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 PLA2G4CQ9UP65 541 aa22.62■■□□□ 1.21
SMARCD1-212ENST00000551966 CABIN1Q9Y6J0 2220 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 K7ELQ4 463 aaPredicted RBP22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 TULP2O00295 520 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 CALUO43852 315 aaPredicted RBP22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 PCDHGA12O60330 932 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 SEMA4FO95754 770 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 CTSKP43235 329 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 TKTL1P51854 596 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 RAD23BP54727 409 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 TEAD4Q15561 434 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 FNDC3BQ53EP0 1204 aaKnown RBP22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 ARHGAP17Q68EM7 881 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 DHRS13Q6UX07 377 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 CHST9Q7L1S5 443 aa22.61■■□□□ 1.21
SMARCD1-212ENST00000551966 PDCD7Q8N8D1 485 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms