RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 KCNJ12Q14500 433 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 POSTNQ15063 836 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 BTBD16Q32M84 506 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 LRCH2Q5VUJ6 765 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 PIK3AP1Q6ZUJ8 805 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 RFX8Q6ZV50 586 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 ZNF354CQ86Y25 554 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 GALNT15Q8N3T1 639 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 PDILTQ8N807 584 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 TERB1Q8NA31 727 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 OR1N1Q8NGS0 311 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 DAZAP1Q96EP5 407 aaKnown RBP4.42□□□□□ -1.7
CAST-229ENST00000510098 HS6ST2Q96MM7 605 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 FBXO28Q9NVF7 368 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 NRBP1Q9UHY1 535 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 VPS4AQ9UN37 437 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 PCDHB2Q9Y5E7 798 aa4.42□□□□□ -1.7
CAST-229ENST00000510098 SMIM22K7EJ46 135 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 IPO5O00410 1097 aaKnown RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 CTIFO43310 598 aaKnown RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 DHHO43323 396 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 PPP6R2O75170 966 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 RPP40O75818 363 aaKnown RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 CER1O95813 267 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 NHLRC4P0CG21 123 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 TMIGD3P0DMS9 266 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 VEGFAP15692 232 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 BIRC3Q13489 604 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 CBFBQ13951 182 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 RPS6KA2Q15349 733 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 SRSF7Q16629 238 aaKnown RBP eCLIP4.41□□□□□ -1.7
CAST-229ENST00000510098 RNASE12Q5GAN4 147 aaKnown RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 FAM90A2PQ658T7 463 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 JMJD6Q6NYC1 403 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 MSANTD2Q6P1R3 559 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 SERPINA13PQ6UXR4 307 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 LDHAL6AQ6ZMR3 332 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 TRIM72Q6ZMU5 477 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 ZNF782Q6ZMW2 699 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 RAB11FIP2Q7L804 512 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 TRABD2AQ86V40 505 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 SLC44A2Q8IWA5 706 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 STT3BQ8TCJ2 826 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 SLC22A17Q8WUG5 538 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 OVCA2Q8WZ82 227 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 RSC1A1Q92681 617 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 MACROD1Q9BQ69 325 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 THAP7Q9BT49 309 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 FAM167BQ9BTA0 163 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 PABPC3Q9H361 631 aaKnown RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 CCDC134Q9H6E4 229 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 ELAC1Q9H777 363 aaKnown RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 SAP30LQ9HAJ7 183 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 MLXIPQ9HAP2 919 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 PRDM8Q9NQV8 689 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 FLRT1Q9NZU1 646 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 UBE2J1Q9Y385 318 aaPredicted RBP4.41□□□□□ -1.7
CAST-229ENST00000510098 PCDHGB3Q9Y5G1 929 aa4.41□□□□□ -1.7
CAST-229ENST00000510098 KIF28PB7ZC32 967 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 IRAK2O43187 625 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 TIMM44O43615 452 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 LDHCP07864 332 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 DHRS4L1P0CG22 281 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 ALADP13716 330 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 THBS4P35443 961 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 IGHMBP2P38935 993 aaKnown RBP4.4□□□□□ -1.71
CAST-229ENST00000510098 HOXA4Q00056 320 aaPredicted RBP4.4□□□□□ -1.71
CAST-229ENST00000510098 DNASE1L3Q13609 305 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 EZH2Q15910 746 aaKnown RBP4.4□□□□□ -1.71
CAST-229ENST00000510098 PROSER3Q2NL68 480 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 ZNF569Q5MCW4 686 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 PRAMEF17Q5VTA0 474 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 ANKRD40Q6AI12 368 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 TANGO2Q6ICL3 276 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 NFRKBQ6P4R8 1299 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 C12orf76Q8N812 135 aaPredicted RBP4.4□□□□□ -1.71
CAST-229ENST00000510098 MAFAQ8NHW3 353 aaPredicted RBP4.4□□□□□ -1.71
CAST-229ENST00000510098 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 OTUD7AQ8TE49 926 aaPredicted RBP4.4□□□□□ -1.71
CAST-229ENST00000510098 HMGB4Q8WW32 186 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 C3orf49Q96BT1 292 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 TBC1D20Q96BZ9 403 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 FAR2Q96K12 515 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 TRAPPC9Q96Q05 1148 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 SNX18Q96RF0 628 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 ISCA1Q9BUE6 129 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 SEMA4CQ9C0C4 833 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 SAYSD1Q9NPB0 183 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 VPS45Q9NRW7 570 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.4□□□□□ -1.71
CAST-229ENST00000510098 PCDHB7Q9Y5E2 793 aa4.4□□□□□ -1.71
CAST-229ENST00000510098 COL3A1P02461 1466 aaPredicted RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 DNAJC9-AS1A6NH13 148 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 EFCAB8A8MWE9 144 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 PRAMEF2O60811 474 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 GCATO75600 419 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 SLC3A2P08195 630 aaKnown RBP4.39□□□□□ -1.71
CAST-229ENST00000510098 CELA2AP08217 269 aa4.39□□□□□ -1.71
CAST-229ENST00000510098 CERS1P27544 350 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms