RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
CAST-229ENST00000510098 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
CAST-229ENST00000510098 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
CAST-229ENST00000510098 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
CAST-229ENST00000510098 FOXD1Q16676 465 aa17.77■□□□□ 0.44
CAST-229ENST00000510098 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
CAST-229ENST00000510098 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
CAST-229ENST00000510098 ADRA2BP18089 450 aa16.67■□□□□ 0.26
CAST-229ENST00000510098 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
CAST-229ENST00000510098 MSH5O43196 834 aa16.56■□□□□ 0.24
CAST-229ENST00000510098 POTEDQ86YR6 584 aa15.86■□□□□ 0.13
CAST-229ENST00000510098 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
CAST-229ENST00000510098 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
CAST-229ENST00000510098 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
CAST-229ENST00000510098 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
CAST-229ENST00000510098 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
CAST-229ENST00000510098 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
CAST-229ENST00000510098 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
CAST-229ENST00000510098 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
CAST-229ENST00000510098 KCNA4P22459 653 aa14.47□□□□□ -0.09
CAST-229ENST00000510098 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
CAST-229ENST00000510098 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
CAST-229ENST00000510098 DNAJC5BQ9UF47 199 aa14.27□□□□□ -0.12
CAST-229ENST00000510098 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
CAST-229ENST00000510098 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
CAST-229ENST00000510098 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
CAST-229ENST00000510098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.183e-7■■■■□ 20.1
CAST-229ENST00000510098 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
CAST-229ENST00000510098 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
CAST-229ENST00000510098 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
CAST-229ENST00000510098 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
CAST-229ENST00000510098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.37□□□□□ -0.27
CAST-229ENST00000510098 HNRNPUL2Q1KMD3 747 aaKnown RBP13.37□□□□□ -0.27
CAST-229ENST00000510098 ZBTB22O15209 634 aa13.33□□□□□ -0.28
CAST-229ENST00000510098 CAPN15O75808 1086 aa13.33□□□□□ -0.28
CAST-229ENST00000510098 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
CAST-229ENST00000510098 DSG3P32926 999 aa13.32□□□□□ -0.28
CAST-229ENST00000510098 APLP2Q06481 763 aa13.32□□□□□ -0.28
CAST-229ENST00000510098 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
CAST-229ENST00000510098 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
CAST-229ENST00000510098 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
CAST-229ENST00000510098 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
CAST-229ENST00000510098 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
CAST-229ENST00000510098 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
CAST-229ENST00000510098 ABCB7O75027 752 aa13.03□□□□□ -0.32
CAST-229ENST00000510098 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
CAST-229ENST00000510098 POLA2Q14181 598 aa12.89□□□□□ -0.35
CAST-229ENST00000510098 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
CAST-229ENST00000510098 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
CAST-229ENST00000510098 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
CAST-229ENST00000510098 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
CAST-229ENST00000510098 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
CAST-229ENST00000510098 POTEHQ6S545 545 aa12.44□□□□□ -0.42
CAST-229ENST00000510098 FBLN2P98095 1184 aa12.4□□□□□ -0.42
CAST-229ENST00000510098 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
CAST-229ENST00000510098 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
CAST-229ENST00000510098 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
CAST-229ENST00000510098 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
CAST-229ENST00000510098 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
CAST-229ENST00000510098 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
CAST-229ENST00000510098 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
CAST-229ENST00000510098 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
CAST-229ENST00000510098 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
CAST-229ENST00000510098 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.476e-6■□□□□ 10
CAST-229ENST00000510098 PIP4P2Q8N4L2 257 aa12.08□□□□□ -0.48
CAST-229ENST00000510098 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
CAST-229ENST00000510098 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
CAST-229ENST00000510098 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
CAST-229ENST00000510098 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
CAST-229ENST00000510098 FKBP8Q14318 412 aa11.86□□□□□ -0.51
CAST-229ENST00000510098 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
CAST-229ENST00000510098 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
CAST-229ENST00000510098 SP7Q8TDD2 431 aaPredicted RBP11.76□□□□□ -0.53
CAST-229ENST00000510098 PROM2Q8N271 834 aa11.75□□□□□ -0.53
CAST-229ENST00000510098 HAX1O00165 279 aa11.73□□□□□ -0.53
CAST-229ENST00000510098 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
CAST-229ENST00000510098 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
CAST-229ENST00000510098 C19orf67A6NJJ6 358 aa11.68□□□□□ -0.54
CAST-229ENST00000510098 EVX2Q03828 476 aa11.68□□□□□ -0.54
CAST-229ENST00000510098 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
CAST-229ENST00000510098 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
CAST-229ENST00000510098 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
CAST-229ENST00000510098 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
CAST-229ENST00000510098 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
CAST-229ENST00000510098 GABBR2O75899 941 aa11.42□□□□□ -0.58
CAST-229ENST00000510098 MIER1Q8N108 512 aa11.39□□□□□ -0.59
CAST-229ENST00000510098 CLCN6P51797 869 aa11.37□□□□□ -0.59
CAST-229ENST00000510098 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
CAST-229ENST00000510098 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
CAST-229ENST00000510098 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
CAST-229ENST00000510098 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
CAST-229ENST00000510098 ZRANB1Q9UGI0 708 aa11.31□□□□□ -0.6
CAST-229ENST00000510098 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
CAST-229ENST00000510098 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
CAST-229ENST00000510098 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
CAST-229ENST00000510098 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
CAST-229ENST00000510098 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
CAST-229ENST00000510098 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
CAST-229ENST00000510098 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
CAST-229ENST00000510098 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms