RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ZNF75CPQ92670 426 aaPredicted RBP16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 GPAMQ9HCL2 828 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 CYP4F12Q9HCS2 524 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 NRCAMQ92823 1304 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 CASTOR2A6NHX0 329 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 ALADP13716 330 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 CSTF3Q12996 717 aaKnown RBP16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 PCBP1Q15365 356 aaKnown RBP eCLIP16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 DEPDC1Q5TB30 811 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 FOXR1Q6PIV2 292 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 ETNPPLQ8TBG4 499 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 PLEKHA8Q96JA3 519 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 CDK5RAP1Q96SZ6 601 aaKnown RBP16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 MMADHCQ9H3L0 296 aaPredicted RBP16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 NR2C2P49116 596 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 CCDC15Q0P6D6 951 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 NFYCQ13952 458 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 FICDQ9BVA6 458 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 LRCH1Q9Y2L9 728 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 SERPIND1P05546 499 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 FCGR1AP12314 374 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 SERPINB1P30740 379 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 SNX30Q5VWJ9 437 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 PLPPR4Q7Z2D5 763 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 ADCK2Q7Z695 626 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 DDHD1Q8NEL9 900 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 FZD1Q9UP38 647 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 RAD54BQ9Y620 910 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 HMGCRP04035 888 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 SNHG28P0DPA3 235 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 FKBP1BP68106 108 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 MRPL28Q13084 256 aaKnown RBP16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 TERB1Q8NA31 727 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 ZBTB45Q96K62 511 aaPredicted RBP16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 HSD17B14Q9BPX1 270 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 FBXO44Q9H4M3 255 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 CHST7Q9NS84 486 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 CASZ1Q86V15 1759 aa16.57■□□□□ 0.24
HMGXB3-202ENST00000503427 UBDO15205 165 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 FUKQ8N0W3 1084 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 GANQ9H2C0 597 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 VTI1BQ9UEU0 232 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 GGA2Q9UJY4 613 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 C15orf41Q9Y2V0 281 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 UMODL1Q5DID0 1318 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 SPATA31C2B4DYI2 1134 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 PGAM1P18669 254 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 PACS2Q86VP3 889 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 RMND5AQ9H871 391 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 TUBGCP4Q9UGJ1 667 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 APOC4-APOC2K7ER74 178 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 TRIM13O60858 407 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 MAFO75444 373 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 ARIH2O95376 493 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 APOC2P02655 101 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 AKAP5P24588 427 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 RTP1P59025 263 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 CDH17Q12864 832 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 CSHL1Q14406 222 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 RRP1BQ14684 758 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 POLD3Q15054 466 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 ZBTB49Q6ZSB9 765 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 HS6ST3Q8IZP7 471 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 EPS8L1Q8TE68 723 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 HTR3CQ8WXA8 447 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 MYLK2Q9H1R3 596 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 TBC1D13Q9NVG8 400 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 MPP6Q9NZW5 540 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 PCYOX1Q9UHG3 505 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 TRDMT1O14717 391 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 CABYRO75952 493 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 GLRA2P23416 452 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 TMED10P49755 219 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 ITGA9Q13797 1035 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 PALMDQ9NP74 551 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 PCDHB5Q9Y5E4 795 aa16.56■□□□□ 0.24
HMGXB3-202ENST00000503427 MBL2P11226 248 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 ILF2Q12905 390 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 MMRN1Q13201 1228 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 HIST2H2ACQ16777 129 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 HIST2H2AA3Q6FI13 130 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 TMEM161BQ8NDZ6 487 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 SMARCD1Q96GM5 515 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 C10orf88Q9H8K7 445 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 CRTAMO95727 393 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 MAPK1P28482 360 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 CACNA2D1P54289 1103 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 ITGB3BPQ13352 177 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 H2AFY2Q9P0M6 372 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 A0A0U1RQJ8 604 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 TPBGLP0DKB5 382 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 HNRNPH3P31942 346 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 YWHAZP63104 245 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 CDK16Q00536 496 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 EFEMP1Q12805 493 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 NAB1Q13506 487 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 OASLQ15646 514 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 SPANXN3Q5MJ09 141 aa16.55■□□□□ 0.24
HMGXB3-202ENST00000503427 CCDC81Q6ZN84 652 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms