RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 MON1AQ86VX9 555 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 GOLGA6L1Q8N7Z2 621 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 COLGALT1Q8NBJ5 622 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 C2orf15Q8WU43 125 aaKnown RBP18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 FBXO32Q969P5 355 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 EPB41L4BQ9H329 900 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 SEMA4AQ9H3S1 761 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 DTLQ9NZJ0 730 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 TPX2Q9ULW0 747 aaKnown RBP18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 RNF40O75150 1001 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 LAG3P18627 525 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 ATF6P18850 670 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 YWHAQP27348 245 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 SLMAPQ14BN4 828 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 GIPC2Q8TF65 315 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 SH3GL2Q99962 352 aa18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 PABPC3Q9H361 631 aaKnown RBP18.42■□□□□ 0.54
CHRNA4-206ENST00000498043 GLUD2P49448 558 aa18.41■□□□□ 0.54
CHRNA4-206ENST00000498043 RNASEH2BQ5TBB1 312 aaKnown RBP18.41■□□□□ 0.54
CHRNA4-206ENST00000498043 CDKL3Q8IVW4 592 aaPredicted RBP18.41■□□□□ 0.54
CHRNA4-206ENST00000498043 BACE2Q9Y5Z0 518 aa18.41■□□□□ 0.54
CHRNA4-206ENST00000498043 H0YGN5 161 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 RTN3O95197 1032 aaPredicted RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 RARGP13631 454 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 STIP1P31948 543 aaKnown RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 NR2C2P49116 596 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 TAF10Q12962 218 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 EIF4EBP2Q13542 120 aaPredicted RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 CEP85LQ5SZL2 805 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 C16orf59Q7L2K0 433 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 SPATA17Q96L03 361 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 CLSTN3Q9BQT9 956 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 CDC42EP4Q9H3Q1 356 aaKnown RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 USP29Q9HBJ7 922 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 OR12D3Q9UGF7 316 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 NFS1Q9Y697 457 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 OPA1O60313 960 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 DNAJB2P25686 324 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 RPL10AP62906 217 aaKnown RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 BASP1P80723 227 aaKnown RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 MORF4L2Q15014 288 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 SLC45A4Q5BKX6 768 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 SPDYCQ5MJ68 293 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 DENND2CQ68D51 928 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 ARHGAP18Q8N392 663 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 ZCCHC9Q8N567 271 aaKnown RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 SERPINB11Q96P15 392 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 OLFM3Q96PB7 478 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 QKIQ96PU8 341 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 EPAS1Q99814 870 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 HERC2P3Q9BVR0 1158 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 SPG21Q9NZD8 308 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 IL37Q9NZH6 218 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 VPS18Q9P253 973 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 MAGED2Q9UNF1 606 aaPredicted RBP18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 SHOC2Q9UQ13 582 aa18.4■□□□□ 0.54
CHRNA4-206ENST00000498043 FAM92AA1XBS5 289 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 BCLAF3A2AJT9 711 aaKnown RBP18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 CFAP69A5D8W1 941 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 GOLGA8MH3BSY2 632 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 DCLK1O15075 740 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 ERCC2P18074 760 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 CCR1P32246 355 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 DSG1Q02413 1049 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 ZNF844Q08AG5 666 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 ANKRD22Q5VYY1 191 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 LRIG3Q6UXM1 1119 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 UBE2Q1Q7Z7E8 422 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 UHMK1Q8TAS1 419 aaKnown RBP18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 AUTS2Q8WXX7 1259 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 CPT1BQ92523 772 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 PRCCQ92733 491 aaPredicted RBP18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 BADQ92934 168 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 MCOLN1Q9GZU1 580 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 ARHGEF38Q9NXL2 777 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 PRKAG2Q9UGJ0 569 aa18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 FARP1Q9Y4F1 1045 aaPredicted RBP18.39■□□□□ 0.53
CHRNA4-206ENST00000498043 RIPK2O43353 540 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 LRIG2O94898 1065 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 MOCS2O96007 188 aaPredicted RBP18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 ACTN2P35609 894 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 GYS2P54840 703 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 XRCC4Q13426 336 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 BRMS1LQ5PSV4 323 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 ARL8AQ96BM9 186 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 RTP4Q96DX8 246 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 LGMNQ99538 433 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 SIK2Q9H0K1 926 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 TSPYL1Q9H0U9 437 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 NR2E3Q9Y5X4 410 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 SLC38A8A6NNN8 435 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 ACSL3O95573 720 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 SHBGP04278 402 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 URODP06132 367 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 EPHB2P29323 1055 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 GAD2Q05329 585 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 IFFO1Q0D2I5 559 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 EFEMP1Q12805 493 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 SLC29A2Q14542 456 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 PAFAH1B3Q15102 231 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms