RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 ARHGAP10A1A4S6 786 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 TGFB3P10600 412 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
SMTN-218ENST00000489337 GTF2H1P32780 548 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 IRX4P78413 519 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 MAP2K5Q13163 448 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 CDO1Q16878 200 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 XRRA1Q6P2D8 792 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMTN-218ENST00000489337 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
SMTN-218ENST00000489337 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 GAB3Q8WWW8 586 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 EIF2AQ9BY44 585 aaKnown RBP12.13□□□□□ -0.47
SMTN-218ENST00000489337 TIMMDC1Q9NPL8 285 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 AVENQ9NQS1 362 aaPredicted RBP12.13□□□□□ -0.47
SMTN-218ENST00000489337 TDRKHQ9Y2W6 561 aaKnown RBP12.13□□□□□ -0.47
SMTN-218ENST00000489337 NUB1Q9Y5A7 615 aa12.13□□□□□ -0.47
SMTN-218ENST00000489337 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 DHRS4L1P0CG22 281 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 RAG1P15918 1043 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 NCKAP1LP55160 1127 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 PPIDQ08752 370 aaKnown RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 ZNF792Q3KQV3 632 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 RALGPS1Q5JS13 557 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 IYDQ6PHW0 289 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 MFSD7Q6UXD7 560 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 CRLF3Q8IUI8 442 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 HSPBAP1Q96EW2 488 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 CAPNS2Q96L46 248 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 SHCBP1LQ9BZQ2 653 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 NXF3Q9H4D5 531 aaKnown RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 APPL1Q9UKG1 709 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 FAF1Q9UNN5 650 aaPredicted RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 DTNAQ9Y4J8 743 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 H0YCG3 227 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 SMIM18P0DKX4 95 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 IGFBP6P24592 240 aaPredicted RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 XIAPP98170 497 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 SULT2A1Q06520 285 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 PTP4A2Q12974 167 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 FNBP1LQ5T0N5 605 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 LRRC8BQ6P9F7 803 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 RAET1EQ8TD07 263 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 E2F7Q96AV8 911 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 SNX9Q9Y5X1 595 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 MAFO75444 373 aaPredicted RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 MMP3P08254 477 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 STAG3L1P0CL83 205 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 NAMPTP43490 491 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 CNGA3Q16281 694 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 ZNF699Q32M78 642 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 ANKRD22Q5VYY1 191 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 ATG16L1Q676U5 607 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 CTAGE3PQ8IX95 158 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 SRPK1Q96SB4 655 aaKnown RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 PRPF18Q99633 342 aaKnown RBP12.12□□□□□ -0.47
SMTN-218ENST00000489337 SLC13A1Q9BZW2 595 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 C10orf88Q9H8K7 445 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 ARHGAP28Q9P2N2 729 aa12.12□□□□□ -0.47
SMTN-218ENST00000489337 PAPPA2Q9BXP8 1791 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 PSME4Q14997 1843 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 DNAJC25-GNG10A0A024R161 153 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 PPEF2O14830 753 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 SORBS2O94875 1100 aaKnown RBP12.11□□□□□ -0.47
SMTN-218ENST00000489337 SMIM10L2AP0DMW4 78 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 SMIM10L2BP0DMW5 78 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 PIM1P11309 404 aaPredicted RBP12.11□□□□□ -0.47
SMTN-218ENST00000489337 FDFT1P37268 417 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
SMTN-218ENST00000489337 TLR1Q15399 786 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 HSF5Q4G112 596 aaPredicted RBP12.11□□□□□ -0.47
SMTN-218ENST00000489337 TCHHL1Q5QJ38 904 aaPredicted RBP12.11□□□□□ -0.47
SMTN-218ENST00000489337 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 C12orf56Q8IXR9 622 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 PDIK1LQ8N165 341 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 Q9H521 79 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 RNF186Q9NXI6 227 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 FETUBQ9UGM5 382 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 MAD1L1Q9Y6D9 718 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 VCANP13611 3396 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
SMTN-218ENST00000489337 LACTBL1A8MY62 500 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 PROCP04070 461 aa12.11□□□□□ -0.47
SMTN-218ENST00000489337 UNGP13051 313 aaPredicted RBP12.11□□□□□ -0.47
SMTN-218ENST00000489337 PCSK6P29122 969 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms