RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 VAT1LQ9HCJ6 419 aa7.15□□□□□ -1.26
CLK1-212ENST00000482590 THG1LQ9NWX6 298 aaKnown RBP7.15□□□□□ -1.26
CLK1-212ENST00000482590 CTNNA3Q9UI47 895 aa7.15□□□□□ -1.26
CLK1-212ENST00000482590 OAZ3Q9UMX2 235 aa7.15□□□□□ -1.26
CLK1-212ENST00000482590 ZKSCAN5Q9Y2L8 839 aa7.15□□□□□ -1.26
CLK1-212ENST00000482590 SNX5Q9Y5X3 404 aa7.15□□□□□ -1.26
CLK1-212ENST00000482590 EIF3FO00303 357 aaPredicted RBP7.14□□□□□ -1.27
CLK1-212ENST00000482590 FRS3O43559 492 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 NARSO43776 548 aaKnown RBP7.14□□□□□ -1.27
CLK1-212ENST00000482590 ZNF202O95125 648 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 POU2F2P09086 479 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 CR2P20023 1033 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 ACO1P21399 889 aaKnown RBP7.14□□□□□ -1.27
CLK1-212ENST00000482590 KRT9P35527 623 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 WDR5P61964 334 aaKnown RBP7.14□□□□□ -1.27
CLK1-212ENST00000482590 DGCR2P98153 550 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 ABHD18Q0P651 414 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 TRDNQ13061 729 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 NOLC1Q14978 699 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLK1-212ENST00000482590 FKBP15Q5T1M5 1219 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 IZUMO3Q5VZ72 239 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 CCDC62Q6P9F0 684 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 DSTYKQ6XUX3 929 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 RPAINQ86UA6 219 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 SESTD1Q86VW0 696 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 HERC6Q8IVU3 1022 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLK1-212ENST00000482590 SH3RF2Q8TEC5 729 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 CHTF18Q8WVB6 975 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 TBC1D5Q92609 795 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 SLC5A5Q92911 643 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 VMP1Q96GC9 406 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 CHCHD6Q9BRQ6 235 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 AMNQ9BXJ7 453 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 GTPBP4Q9BZE4 634 aaKnown RBP7.14□□□□□ -1.27
CLK1-212ENST00000482590 CD244Q9BZW8 370 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 NUP62CLQ9H1M0 184 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 UBN1Q9NPG3 1134 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 PXMP2Q9NR77 195 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 COL20A1Q9P218 1284 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 IFT80Q9P2H3 777 aaPredicted RBP7.14□□□□□ -1.27
CLK1-212ENST00000482590 HDAC6Q9UBN7 1215 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 B4GALT6Q9UBX8 382 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 GIMAP2Q9UG22 337 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 L1RE1Q9UN81 338 aa7.14□□□□□ -1.27
CLK1-212ENST00000482590 COL4A6Q14031 1691 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 ERICH2A1L162 156 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 H3BML4 177 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 CUTAO60888 179 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 CSTBP04080 98 aaKnown RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 ZNF286BP0CG31 522 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 MYCLP12524 364 aaPredicted RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 TNFSF4P23510 183 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 PIK3CBP42338 1070 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 KPNA1P52294 538 aaPredicted RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 CLNS1AP54105 237 aaKnown RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 ARL4CP56559 192 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 SNX16P57768 344 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 PLIN5Q00G26 463 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 PTH1RQ03431 593 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 TAP1Q03518 808 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 DBPQ10586 325 aaPredicted RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 TRAF1Q13077 416 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 PLBD1Q6P4A8 553 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 KCNV1Q6PIU1 500 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 RFX8Q6ZV50 586 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 BRSK2Q8IWQ3 736 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 ARL6IP6Q8N6S5 226 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 LSM14AQ8ND56 463 aaKnown RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 PPP1R35Q8TAP8 253 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 TRAPPC12Q8WVT3 735 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 ANKS1AQ92625 1134 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 MAP3K14Q99558 947 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 DPYSL5Q9BPU6 564 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 TREX2Q9BQ50 279 aaPredicted RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 PDCD2LQ9BRP1 358 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 FAM167BQ9BTA0 163 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 TMEM120AQ9BXJ8 343 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 MRPL9Q9BYD2 267 aaKnown RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 XPO4Q9C0E2 1151 aaKnown RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 ELAC1Q9H777 363 aaKnown RBP7.13□□□□□ -1.27
CLK1-212ENST00000482590 IPPKQ9H8X2 491 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 JMJD4Q9H9V9 463 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 WASH6PQ9NQA3 447 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 DMRT3Q9NQL9 472 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 ITM2CQ9NQX7 267 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 NSMCE4AQ9NXX6 385 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 COG5Q9UP83 839 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 MTCH2Q9Y6C9 303 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 SLC30A1Q9Y6M5 507 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 EVPLQ92817 2033 aa7.13□□□□□ -1.27
CLK1-212ENST00000482590 EMSYQ7Z589 1322 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 GOLGA6L6A8MZA4 724 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 KLRF2D3W0D1 207 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 FAM47E-STBD1D6RA91 191 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 MATN2O00339 956 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 ZBTB5O15062 677 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 H2AFYO75367 372 aaKnown RBP7.12□□□□□ -1.27
CLK1-212ENST00000482590 GGPS1O95749 300 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 BAG2O95816 211 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms