RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 TM7SF3Q9NS93 570 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 ELOVL2Q9NXB9 296 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 EIF2B4Q9UI10 523 aaKnown RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 MAPK8IP1Q9UQF2 711 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 APOBEC2Q9Y235 224 aaKnown RBP12.57□□□□□ -0.4
GCA-208ENST00000479199 GPSM3Q9Y4H4 160 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 KNTC1P50748 2209 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 DOCK9Q9BZ29 2069 aa12.57□□□□□ -0.4
GCA-208ENST00000479199 A0A1B0GVT2 93 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 TULP2O00295 520 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 KRT13P13646 458 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 HOXD9P28356 352 aaPredicted RBP12.56□□□□□ -0.4
GCA-208ENST00000479199 OXTRP30559 389 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 ZNF132P52740 706 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 EIF4HQ15056 248 aaKnown RBP12.56□□□□□ -0.4
GCA-208ENST00000479199 RAB41Q5JT25 222 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 LAYNQ6UX15 382 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 CCNI2Q6ZMN8 369 aaPredicted RBP12.56□□□□□ -0.4
GCA-208ENST00000479199 BHLHA9Q7RTU4 235 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 FAM217AQ8IXS0 508 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 CPXM2Q8N436 756 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 CCDC150Q8NCX0 1101 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 C1orf216Q8TAB5 229 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 BAHD1Q8TBE0 780 aaPredicted RBP12.56□□□□□ -0.4
GCA-208ENST00000479199 MDM1Q8TC05 714 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 CYB5D2Q8WUJ1 264 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 CCDC86Q9H6F5 360 aaKnown RBP12.56□□□□□ -0.4
GCA-208ENST00000479199 C6orf106Q9H6K1 298 aaPredicted RBP12.56□□□□□ -0.4
GCA-208ENST00000479199 TMEM8AQ9HCN3 771 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 CISHQ9NSE2 258 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 RCOR1Q9UKL0 485 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 STRIP2Q9ULQ0 834 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 CELSR3Q9NYQ7 3312 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 SHROOM3Q8TF72 1996 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 LOC400499M0QZD8 3231 aa12.56□□□□□ -0.4
GCA-208ENST00000479199 TSPAN3O60637 253 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 ZNF883P0CG24 379 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 ACADMP11310 421 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 CSNK1EP49674 416 aaKnown RBP12.55□□□□□ -0.4
GCA-208ENST00000479199 MXI1P50539 228 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 TKTL1P51854 596 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 RAD23BP54727 409 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 NFIL3Q16649 462 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 GOLGA7BQ2TAP0 167 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 HLA-BQ31612 363 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 FNDC3BQ53EP0 1204 aaKnown RBP12.55□□□□□ -0.4
GCA-208ENST00000479199 MARCH9Q86YJ5 346 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 OR2T3Q8NH03 318 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 SNX21Q969T3 373 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 PLD4Q96BZ4 506 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 DNAI2Q9GZS0 605 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 LHX5Q9H2C1 402 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 TOR4AQ9NXH8 423 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 CFAP45Q9UL16 551 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 HPSEQ9Y251 543 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 BTBD3Q9Y2F9 522 aa12.55□□□□□ -0.4
GCA-208ENST00000479199 LAMA5O15230 3695 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 COL5A1P20908 1838 aaPredicted RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 MSI1O43347 362 aaKnown RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 RHOBTB3O94955 611 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 MYL1P05976 194 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 HSP90AA1P07900 732 aaKnown RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 ATXN1LP0C7T5 689 aaKnown RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 HLA-FP30511 346 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ACSL1P33121 698 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 PSMC2P35998 433 aaKnown RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 SGSHP51688 502 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ARID5AQ03989 594 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ADIGQ0VDE8 80 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 CAMK2GQ13555 558 aaPredicted RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 TRIP4Q15650 581 aaPredicted RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 KIF19Q2TAC6 998 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ZCWPW2Q504Y3 356 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 KRT39Q6A163 491 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 IL27RAQ6UWB1 636 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 PDZD3Q86UT5 571 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 FMNL3Q8IVF7 1028 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ZC3H3Q8IXZ2 948 aaKnown RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 EEF2KMTQ96G04 330 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 SLC2A11Q9BYW1 496 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 SFMBT1Q9UHJ3 866 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 USP25Q9UHP3 1055 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.54□□□□□ -0.4
GCA-208ENST00000479199 SNX11Q9Y5W9 270 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 ASXL3Q9C0F0 2248 aa12.54□□□□□ -0.4
GCA-208ENST00000479199 FLRT2O43155 660 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 ZBED1O96006 694 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 CMA1P23946 247 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms