RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 VPS16Q9H269 839 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 ELAC1Q9H777 363 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 GAR1Q9NY12 217 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 DAPP1Q9UN19 280 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 CNTN6Q9UQ52 1028 aa5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 UBE2J1Q9Y385 318 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-205ENST00000477763 POC1B-GALNT4F8VUJ3 575 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 CA12O43570 354 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 PPP6R2O75170 966 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 RPP40O75818 363 aaKnown RBP5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM155BO75949 473 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 PDE8BO95263 885 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 FPR3P25089 353 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 ADD2P35612 726 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 AARSP49588 968 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 DIO1P49895 249 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 CDK7P50613 346 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 DEUP1Q05D60 604 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 TAF12Q16514 161 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 BTBD16Q32M84 506 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 TBRG1Q3YBR2 411 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 COLEC12Q5KU26 742 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 BCDIN3DQ7Z5W3 292 aaKnown RBP5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 FTSJ3Q8IY81 847 aaKnown RBP5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 GALNT4Q8N4A0 578 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 LINC01465Q8N7H1 131 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 C12orf76Q8N812 135 aaPredicted RBP5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 SPPL3Q8TCT6 385 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 SLC22A17Q8WUG5 538 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 DPF1Q92782 380 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 REXO5Q96IC2 774 aaKnown RBP5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 FAR2Q96K12 515 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 CCDC134Q9H6E4 229 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 USP29Q9HBJ7 922 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 LIN7CQ9NUP9 197 aaKnown RBP5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 FLRT1Q9NZU1 646 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 NDUFAF4Q9P032 175 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 GTF2A1LQ9UNN4 478 aa5.24□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM90A18PA6NE21 464 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM90A16PA6NEW6 464 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 MANSC4A6NHS7 340 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM90A9PA6NNJ1 464 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM90A5PA8MXJ8 464 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 KIF28PB7ZC32 967 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 BTBD19C9JJ37 291 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 EXOC3O60645 756 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 CHRM5P08912 532 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM90A15PP0C7V4 464 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FAM90A14PP0C7W9 464 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 MAPK9P45984 424 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 TUBA4AP68366 448 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 LMAN2Q12907 356 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FBXO47Q5MNV8 452 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 PRAMEF17Q5VTA0 474 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 THAP4Q8WY91 577 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FYTTD1Q96QD9 318 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 MMS19Q96T76 1030 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 SEMA4CQ9C0C4 833 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 ASAP1Q9ULH1 1129 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 FRMD4BQ9Y2L6 1034 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 PCDHB7Q9Y5E2 793 aa5.23□□□□□ -1.57
SMNDC1-205ENST00000477763 GXYLT2A0PJZ3 443 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 TISP43B9A030 160 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 H0Y3Z8 333 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 UBE2Q2LH0YL09 131 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 LATS1O95835 1130 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 MT-CO3P00414 261 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 THBS4P35443 961 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 IGHMBP2P38935 993 aaKnown RBP5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 PAPOLAP51003 745 aaKnown RBP5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 COPB1P53618 953 aaKnown RBP5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 MRPS21P82921 87 aaKnown RBP5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 SF3A3Q12874 501 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 CUL4BQ13620 913 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 TTC22Q5TAA0 569 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 ACSM6Q6P461 480 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 CYP26C1Q6V0L0 522 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 RRAGAQ7L523 313 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 OR52L2PQ8NGH6 319 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 ADAMTS18Q8TE60 1221 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 AFG1LQ8WV93 481 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 GOLGA1Q92805 767 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 RITA1Q96K30 269 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 SAP30LQ9HAJ7 183 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 VPS45Q9NRW7 570 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 ADARB2Q9NS39 739 aaKnown RBP5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 TMLHEQ9NVH6 421 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 ASIC5Q9NY37 505 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 BAG5Q9UL15 447 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 ZBTB1Q9Y2K1 713 aa5.22□□□□□ -1.57
SMNDC1-205ENST00000477763 CCDC187A0A096LP49 1063 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 TCRBV5S1A1TA0A578 114 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 PRRT4C9JH25 899 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 E7EVH7 732 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 H3BNC9 293 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 SMIM22K7EJ46 135 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 NHLRC4P0CG21 123 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 ALADP13716 330 aa5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 APEHP13798 732 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-205ENST00000477763 MATN1P21941 496 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms