RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CCND2P30279 289 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 PTGS2P35354 604 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 FCHO2Q0JRZ9 810 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 GNA13Q14344 377 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 C6orf10Q5SRN2 563 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 SCARA3Q6AZY7 606 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 PPP1R2P3Q6NXS1 205 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 FIP1L1Q6UN15 594 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 EEPD1Q7L9B9 569 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 KIAA2013Q8IYS2 634 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 C1orf74Q96LT6 269 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 PDCD2LQ9BRP1 358 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 LXNQ9BS40 222 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 AGO4Q9HCK5 861 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 SLC7A8Q9UHI5 535 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 PLA2G4CQ9UP65 541 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 MTO1Q9Y2Z2 717 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 GPSM3Q9Y4H4 160 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 DTNAQ9Y4J8 743 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 MYCLP12524 364 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 KRT5P13647 590 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 CASP5P51878 434 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 CCNJQ5T5M9 372 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 TMC5Q6UXY8 1006 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 STXBP4Q6ZWJ1 553 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 SLFN11Q7Z7L1 901 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 REPS2Q8NFH8 660 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 TSPAN14Q8NG11 270 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 IL31RAQ8NI17 732 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 ZNF420Q8TAQ5 688 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 ZNF75CPQ92670 426 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 SYT17Q9BSW7 474 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 RUSC1Q9BVN2 902 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 C1orf21Q9H246 121 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 TP63Q9H3D4 680 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 KCTD10Q9H3F6 313 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 LIN28AQ9H9Z2 209 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 UBA2Q9UBT2 640 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 H7C0C1 242 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 PSMD11O00231 422 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 CALUO43852 315 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 GABBR2O75899 941 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 PRKCQQ04759 706 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 BAATQ14032 418 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 MAPRE2Q15555 327 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 TRIP10Q15642 601 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 SMU1Q2TAY7 513 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 C1orf186Q6ZWK4 172 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 OTOAQ7RTW8 1153 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 DENND1AQ8TEH3 1009 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 PSPC1Q8WXF1 523 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 ACAD9Q9H845 621 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 POLMQ9NP87 494 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 SLCO1B3Q9NPD5 702 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 SACM1LQ9NTJ5 587 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 ADAMTS6Q9UKP5 1117 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 ZNF214Q9UL59 606 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 SMG5Q9UPR3 1016 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 CPQQ9Y646 472 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 OR5K4A6NMS3 321 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 DDX39AO00148 427 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 PDXKO00764 312 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 EIF3DO15371 548 aaKnown RBP eCLIP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 NUAK1O60285 661 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 FAM228BP0C875 321 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 HSPA6P17066 643 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 CDK16Q00536 496 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 VGLL4Q14135 290 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 EXOC3L4Q17RC7 722 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 BMT2Q1RMZ1 405 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 CYFIP1Q7L576 1253 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 TMEM151BQ8IW70 566 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 NSUN6Q8TEA1 469 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 ZC3H15Q8WU90 426 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 ISOC1Q96CN7 298 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 UROC1Q96N76 676 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 CCDC77Q9BR77 488 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 HEY2Q9UBP5 337 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 RWDD3Q9Y3V2 267 aa13.03□□□□□ -0.32
RTFDC1-207ENST00000477573 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.32
RTFDC1-207ENST00000477573 RLFQ13129 1914 aa13.02□□□□□ -0.32
RTFDC1-207ENST00000477573 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 MIF4GDA9UHW6 222 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 PSMD12O00232 456 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms