RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	AP3M2	P53677	418 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HMGCS2	P54868	508 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GEMIN4	P57678	1058 aa	Known RBP	6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SNRPF	P62306	86 aa	Known RBP	6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RAD51	Q06609	339 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TOP3A	Q13472	1001 aa	Predicted RBP	6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CHI3L2	Q15782	390 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LIN54	Q6MZP7	749 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PID1	Q7Z2X4	250 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM71A	Q8IYT1	594 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LRRC17	Q8N6Y2	441 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C1orf131	Q8NDD1	294 aa	Known RBP	6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MBOAT7	Q96N66	472 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	P2RX7	Q99572	595 aa	Known RBP	6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	OSBPL7	Q9BZF2	842 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNF302	Q9NR11	478 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	COMMD9	Q9P000	198 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PCYOX1	Q9UHG3	505 aa		6.27	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TIAM2	Q8IVF5	1701 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997		H3BMM5	538 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MATN2	O00339	956 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EDIL3	O43854	480 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SYNCRIP	O60506	623 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GJB6	O95452	261 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NUDT17	P0C025	328 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RXRG	P48443	463 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ABAT	P80404	500 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FMO1	Q01740	532 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CYP24A1	Q07973	514 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NFX1	Q12986	1120 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DDR2	Q16832	855 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CLEC16A	Q2KHT3	1053 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C5orf22	Q49AR2	442 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	XKR3	Q5GH77	459 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PRAMEF18	Q5VWM3	479 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CCNJL	Q8IV13	435 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C4orf19	Q8IY42	314 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MCOLN2	Q8IZK6	566 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ABI1	Q8IZP0	508 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CYP4Z2P	Q8N1L4	340 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PIK3C3	Q8NEB9	887 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SH3TC2	Q8TF17	1288 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LPAR1	Q92633	364 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RFT1	Q96AA3	541 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	WRNIP1	Q96S55	665 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PDCD2L	Q9BRP1	358 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NUAK2	Q9H093	628 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ARHGEF38	Q9NXL2	777 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CYP39A1	Q9NYL5	469 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RPL26L1	Q9UNX3	145 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HBS1L	Q9Y450	684 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SRRM3	A6NNA2	597 aa	Predicted RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DNM1L	O00429	736 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	OPLAH	O14841	1288 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	AXIN1	O15169	862 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HUS1	O60921	280 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RGS4	P49798	205 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CDH6	P55285	790 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NCALD	P61601	193 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ITGA9	Q13797	1035 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EFR3A	Q14156	821 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SMTNL2	Q2TAL5	461 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNF699	Q32M78	642 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	THEMIS2	Q5TEJ8	643 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LLGL2	Q6P1M3	1020 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MARK2	Q7KZI7	788 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CPNE8	Q86YQ8	564 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZSWIM2	Q8NEG5	633 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GRPEL2	Q8TAA5	225 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FEZF2	Q8TBJ5	459 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DLG3	Q92796	817 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SH3KBP1	Q96B97	665 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LENG1	Q96BZ8	264 aa	Predicted RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KREMEN1	Q96MU8	473 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C9orf16	Q9BUW7	83 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DYRK4	Q9NR20	520 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ING3	Q9NXR8	418 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GGA2	Q9UJY4	613 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PROSC	O94903	275 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	POLB	P06746	335 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NPR3	P17342	541 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CSE1L	P55060	971 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MAPK6	Q16659	721 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PMF1	Q6P1K2	205 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM180A	Q6UWF9	173 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EXOC3L1	Q86VI1	746 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CYP4Z1	Q86W10	505 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MOSPD2	Q8NHP6	518 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TMC2	Q8TDI7	906 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SHC3	Q92529	594 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	BORCS5	Q969J3	196 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	THUMPD3	Q9BV44	507 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TEX13B	Q9BXU2	312 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SAR1A	Q9NR31	198 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	STXBP5L	Q9Y2K9	1186 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MYH14	Q7Z406	1995 aa	Known RBP	6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GNB5	O14775	395 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PEX1	O43933	1283 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KATNA1	O75449	491 aa		6.26	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PRL	P01236	227 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms