RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	NUDT18	Q6ZVK8	323 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	ANKS1B	Q7Z6G8	1248 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	UNC93A	Q86WB7	457 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	ZNF276	Q8N554	614 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	OR2T3	Q8NH03	318 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	PIP4K2C	Q8TBX8	421 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	SNX19	Q92543	992 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	PRCC	Q92733	491 aa	Predicted RBP	10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	SNX21	Q969T3	373 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	LMLN	Q96KR4	655 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	NUP58	Q9BVL2	599 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	DUSP16	Q9BY84	665 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	CIPC	Q9C0C6	399 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	PRSS16	Q9NQE7	514 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	SERTAD1	Q9UHV2	236 aa		10.08	□□□□□ -0.8
MCF2L-223	ENST00000473345	SETX	Q7Z333	2677 aa	Known RBP	10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	PLXNA2	O75051	1894 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	SLC12A8	A0AV02	714 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	MSI1	O43347	362 aa	Known RBP	10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	ACTN4	O43707	911 aa	Known RBP	10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	PPP6R2	O75170	966 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	NR3C1	P04150	777 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	CD70	P32970	193 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	GCLM	P48507	274 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	SNRPF	P62306	86 aa	Known RBP	10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	KCNJ12	Q14500	433 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	STARD3	Q14849	445 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	TRIP4	Q15650	581 aa	Predicted RBP	10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	KMT5B	Q4FZB7	885 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	RAB41	Q5JT25	222 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	PIGZ	Q86VD9	579 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	SLC9A9	Q8IVB4	645 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	CPXM2	Q8N436	756 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	SLC4A11	Q8NBS3	891 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	TMC2	Q8TDI7	906 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	TMEM174	Q8WUU8	243 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	SLC6A18	Q96N87	628 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	IPO9	Q96P70	1041 aa	Known RBP	10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	DCBLD2	Q96PD2	775 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	LHX5	Q9H2C1	402 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	CUEDC2	Q9H467	287 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	PNPLA8	Q9NP80	782 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	CLIC5	Q9NZA1	410 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	PCDHA7	Q9UN72	937 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	PCDHA5	Q9Y5H7	936 aa		10.07	□□□□□ -0.8
MCF2L-223	ENST00000473345	GOLGA6L7	A0A1B0GV03	622 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	PVALEF	A0A1B0GWK0	134 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	ZBTB24	O43167	697 aa	Predicted RBP	10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	TNFSF14	O43557	240 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	STX6	O43752	255 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	SYNCRIP	O60506	623 aa	Known RBP	10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	CUTA	O60888	179 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	CLSTN1	O94985	981 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	KIF20A	O95235	890 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	SEMA4F	O95754	770 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	PRR29	P0C7W0	189 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	ATXN8OS	P0DMR3	200 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	OXTR	P30559	389 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	SLC6A4	P31645	630 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	EIF2S3	P41091	472 aa	Known RBP	10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	PIK3CA	P42336	1068 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	RAD23B	P54727	409 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	PKP1	Q13835	747 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	SERPINA13P	Q6UXR4	307 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	CHST9	Q7L1S5	443 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	SCUBE3	Q8IX30	993 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	IQUB	Q8NA54	791 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	COL26A1	Q96A83	441 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	PAGE5	Q96GU1	130 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	NT5C1A	Q9BXI3	368 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	ULBP1	Q9BZM6	244 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	PRORY	Q9H606	182 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	ABCB8	Q9NUT2	735 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	MARCH2	Q9P0N8	246 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	SFMBT1	Q9UHJ3	866 aa		10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	INTS6	Q9UL03	887 aa	Known RBP	10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	URB1	O60287	2271 aa	Known RBP	10.06	□□□□□ -0.8
MCF2L-223	ENST00000473345	ACACA	Q13085	2346 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345		A0A1B0GTQ1	180 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	PCDHGA12	O60330	932 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	FSBP	O95073	299 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	CALCA	P01258	141 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	RPN1	P04843	607 aa	Known RBP	10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	PDC	P20941	246 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	GRIA4	P48058	902 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	VAMP7	P51809	220 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	AFF3	P51826	1226 aa	Known RBP	10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	METAP1	P53582	386 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	AP3M2	P53677	418 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	YWHAG	P61981	247 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	EIF4H	Q15056	248 aa	Known RBP	10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	RESP18	Q5W5W9	173 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	CEP135	Q66GS9	1140 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	NADSYN1	Q6IA69	706 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	RFWD3	Q6PCD5	774 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	IL27RA	Q6UWB1	636 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	KANSL1	Q7Z3B3	1105 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	FMNL3	Q8IVF7	1028 aa		10.05	□□□□□ -0.8
MCF2L-223	ENST00000473345	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms