RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SFTPA1Q8IWL2 248 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 NUP93Q8N1F7 819 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 CPA6Q8N4T0 437 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 ANKRD52Q8NB46 1076 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 SCAMP5Q8TAC9 235 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 ZNF606Q8WXB4 792 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 WBP2Q969T9 261 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 CEP295NLQ96MC4 621 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 P2RY13Q9BPV8 354 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 TTYH3Q9C0H2 523 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 SMPD4Q9NXE4 827 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 TRPM5Q9NZQ8 1165 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 CPQQ9Y646 472 aa9.59□□□□□ -0.87
SMC4-213ENST00000472282 PLXND1Q9Y4D7 1925 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 MED19A0JLT2 244 aaPredicted RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 XPO1O14980 1071 aaKnown RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 MED7O43513 233 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 RTN3O95197 1032 aaPredicted RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 SETSIPP0DME0 302 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 CYP11B1P15538 503 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 STAT1P42224 750 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 RGS7P49802 495 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 NRLP54845 237 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 SLC8A3P57103 927 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 BPIFB4P59827 614 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 SLC7A9P82251 487 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 GRSF1Q12849 480 aaKnown RBP eCLIP9.58□□□□□ -0.882e-14■■■■■ 48.8
SMC4-213ENST00000472282 SIM2Q14190 667 aaPredicted RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 PPP2R5DQ14738 602 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 RSPO4Q2I0M5 234 aaPredicted RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 RNFT1Q5M7Z0 435 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 TAF3Q5VWG9 929 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 ZNF385CQ66K41 422 aaPredicted RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 DENND1BQ6P3S1 775 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 SARM1Q6SZW1 724 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 PIGZQ86VD9 579 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 C12orf40Q86WS4 652 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 PASD1Q8IV76 773 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 SYNPOQ8N3V7 929 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 CD101Q93033 1021 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 SECISBP2LQ93073 1101 aaKnown RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 FBXO32Q969P5 355 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 PNPLA8Q9NP80 782 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 DLL3Q9NYJ7 618 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 CHORDC1Q9UHD1 332 aaPredicted RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.58□□□□□ -0.88
SMC4-213ENST00000472282 ABCA7Q8IZY2 2146 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 SDK1Q7Z5N4 2213 aa9.58□□□□□ -0.88
SMC4-213ENST00000472282 ITIH6Q6UXX5 1313 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 ZNF292O60281 2723 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 ADAMTS9Q9P2N4 1935 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 LRRC53A6NM62 1247 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 ESPNB1AK53 854 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 COCHO43405 550 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 CYP17A1P05093 508 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 MBL2P11226 248 aaPredicted RBP9.57□□□□□ -0.88
SMC4-213ENST00000472282 YWHAQP27348 245 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 KRT9P35527 623 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 PLA2G4AP47712 749 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 SLC6A11P48066 632 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 TKTL1P51854 596 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 KIF11P52732 1056 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 ARID5AQ03989 594 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 ADIGQ0VDE8 80 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 MEA1Q16626 185 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 FIGNQ5HY92 759 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 E4F1Q66K89 784 aaPredicted RBP9.57□□□□□ -0.88
SMC4-213ENST00000472282 LAIR1Q6GTX8 287 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 PMF1Q6P1K2 205 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 NOP9Q86U38 636 aaKnown RBP9.57□□□□□ -0.88
SMC4-213ENST00000472282 WDR5BQ86VZ2 330 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 VSTM4Q8IW00 320 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 RPLP0P6Q8NHW5 317 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 SLC20A1Q8WUM9 679 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 SLC35F5Q8WV83 523 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 ATP2A3Q93084 1043 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 SLITRK1Q96PX8 696 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 HHIPQ96QV1 700 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 LRRC4Q9HBW1 653 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 IL37Q9NZH6 218 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 EHD2Q9NZN4 543 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 GMIPQ9P107 970 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 CFAP97Q9P2B7 532 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 CYTH4Q9UIA0 394 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 NOCTQ9UK39 431 aaKnown RBP9.57□□□□□ -0.88
SMC4-213ENST00000472282 GMEB2Q9UKD1 530 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 MYO6Q9UM54 1294 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 USP18Q9UMW8 372 aa9.57□□□□□ -0.88
SMC4-213ENST00000472282 A0A1W2PQJ5 194 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 FAM170AA1A519 330 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 FAM92AA1XBS5 289 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 K7EQS6 105 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 PIK3R2O00459 728 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 LILRA1O75019 489 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms