RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TERB1Q8NA31 727 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 MNS1Q8NEH6 495 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 KCNV2Q8TDN2 545 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 RAB23Q9ULC3 237 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 MMP17Q9ULZ9 603 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 PLXND1Q9Y4D7 1925 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 NEDD8-MDP1E9PL57 170 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 THAP12O43422 761 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 HRO43593 1189 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 APBB3O95704 486 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 HMBSP08397 361 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 HOXC13P31276 330 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 KRT9P35527 623 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 KIR2DL1P43626 348 aaPredicted RBP15.09■□□□□ 0.01
COL27A1-203ENST00000468565 APBA1Q02410 837 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 TRIP4Q15650 581 aaPredicted RBP15.09■□□□□ 0.01
COL27A1-203ENST00000468565 TSR1Q2NL82 804 aaKnown RBP15.09■□□□□ 0.01
COL27A1-203ENST00000468565 C2orf27AQ580R0 203 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 GRAMD4Q6IC98 578 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 DENND1BQ6P3S1 775 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 CPXM2Q8N436 756 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 ZNF397Q8NF99 534 aaPredicted RBP15.09■□□□□ 0.01
COL27A1-203ENST00000468565 EDEM1Q92611 657 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 GOLGA1Q92805 767 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 NUP58Q9BVL2 599 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 EBF1Q9UH73 591 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 DNAJC12Q9UKB3 198 aa15.09■□□□□ 0.01
COL27A1-203ENST00000468565 AGO1Q9UL18 857 aaKnown RBP15.09■□□□□ 0.01
COL27A1-203ENST00000468565 SART1O43290 800 aaKnown RBP15.08■□□□□ 0
COL27A1-203ENST00000468565 LTFP02788 710 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 SIM2Q14190 667 aaPredicted RBP15.08■□□□□ 0
COL27A1-203ENST00000468565 DPY19L2P1Q6NXN4 242 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 SFTPA1Q8IWL2 248 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 FAM217AQ8IXS0 508 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 HHIPQ96QV1 700 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 HINFPQ9BQA5 517 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 SLC4A5Q9BY07 1137 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 DNAJC17Q9NVM6 304 aaKnown RBP15.08■□□□□ 0
COL27A1-203ENST00000468565 POLR3BQ9NW08 1133 aaPredicted RBP15.08■□□□□ 0
COL27A1-203ENST00000468565 NCDNQ9UBB6 729 aa15.08■□□□□ 0
COL27A1-203ENST00000468565 TBC1D3BA6NDS4 549 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 PIK3R2O00459 728 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 KIF5CO60282 957 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 LATS1O95835 1130 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 PENKP01210 267 aaPredicted RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 USP8P40818 1118 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 ELF2Q15723 593 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 EOGTQ5NDL2 527 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 LAIR1Q6GTX8 287 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 DENND1CQ8IV53 801 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 IL17RCQ8NAC3 791 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 OR8K1Q8NGG5 319 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 CLEC4CQ8WTT0 213 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 GAB3Q8WWW8 586 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 ST7Q9NRC1 585 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 SFMBT1Q9UHJ3 866 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 FBXO10Q9UK96 956 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 AJAP1Q9UKB5 411 aaPredicted RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 GMEB2Q9UKD1 530 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 PCDHGC3Q9UN70 934 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 LUC7L2Q9Y383 392 aaKnown RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 STARD13Q9Y3M8 1113 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 AXIN1O15169 862 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 TIE1P35590 1138 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 PXNP49023 591 aaPredicted RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 HARS2P49590 506 aaKnown RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 PTK2Q05397 1052 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 KCNMA1Q12791 1236 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 SRSF5Q13243 272 aaKnown RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 CRY1Q16526 586 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 C10orf76Q5T2E6 689 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 FYB2Q5VWT5 728 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 PRR23BQ6ZRT6 265 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 BEND5Q7L4P6 421 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 TRMT11Q7Z4G4 463 aaKnown RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 TMEM110Q86TL2 294 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 CCDC33Q8N5R6 958 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 ALLCQ8N6M5 410 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 TSTD1Q8NFU3 115 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 IQCDQ96DY2 449 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 WDR24Q96S15 920 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 TRIM62Q9BVG3 475 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 MIS12Q9H081 205 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 ACP6Q9NPH0 428 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.07■□□□□ 02e-10■■■□□ 18.3
COL27A1-203ENST00000468565 STOML2Q9UJZ1 356 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 CAPN11Q9UMQ6 739 aa15.07■□□□□ 0
COL27A1-203ENST00000468565 V9GYY5 206 aaPredicted RBP15.07■□□□□ 0
COL27A1-203ENST00000468565 ANTXRLA6NF34 631 aa15.06■□□□□ 0
COL27A1-203ENST00000468565 RPP40O75818 363 aaKnown RBP15.06■□□□□ 0
COL27A1-203ENST00000468565 KLF8O95600 359 aaPredicted RBP15.06■□□□□ 0
COL27A1-203ENST00000468565 CISD3P0C7P0 127 aa15.06■□□□□ 0
COL27A1-203ENST00000468565 DGKGP49619 791 aa15.06■□□□□ 0
COL27A1-203ENST00000468565 DGKEP52429 567 aa15.06■□□□□ 0
COL27A1-203ENST00000468565 FKBP15Q5T1M5 1219 aa15.06■□□□□ 0
COL27A1-203ENST00000468565 RASSF3Q86WH2 238 aa15.06■□□□□ 0
COL27A1-203ENST00000468565 DCLK2Q8N568 766 aa15.06■□□□□ 0
COL27A1-203ENST00000468565 GPR161Q8N6U8 529 aaKnown RBP15.06■□□□□ 0
COL27A1-203ENST00000468565 TXNDC5Q8NBS9 432 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms