RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZCCHC2Q9C0B9 1178 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 EBF3Q9H4W6 596 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYH6P13533 1939 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 A0A1B0GUA9 196 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMX2-CTNND1H3BSU7 103 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZBTB39O15060 712 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ACTN4O43707 911 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RAMP2O60895 175 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 LDOC1O95751 146 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 EIF2S1P05198 315 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 HPGDP15428 266 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GUCA1AP43080 201 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CDH6P55285 790 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PRAMEP78395 509 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 IL9RQ01113 521 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CAP1Q01518 475 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RPS6KA2Q15349 733 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANKRD40Q6AI12 368 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 LIX1Q8N485 282 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 WFIKKN2Q8TEU8 576 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 COPS7BQ9H9Q2 264 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TEKT2Q9UIF3 430 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANAPC7Q9UJX3 599 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 NUDT5Q9UKK9 219 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MAN1B1Q9UKM7 699 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 LZTS1Q9Y250 596 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TDRKHQ9Y2W6 561 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SPAG17Q6Q759 2223 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GSAPA4D1B5 854 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RBAK-RBAKDNI3L0D1 243 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TEX28O15482 410 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TBL1XO60907 577 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PPP1R11O60927 126 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 HSF2BPO75031 334 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PRKAR1AP10644 381 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLC2A4P14672 509 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GJA1P17302 382 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ABCG1P45844 678 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 YWHAZP63104 245 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ROR1Q01973 937 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 P4HA3Q7Z4N8 544 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 DENND1CQ8IV53 801 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CTAGE3PQ8IX95 158 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CEP76Q8TAP6 659 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PDZD7Q9H5P4 517 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PRDM6Q9NQX0 595 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CISHQ9NSE2 258 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 H3BNC9 293 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 FPGTO14772 594 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP26A1O43174 497 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLC28A2O43868 658 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TIPRLO75663 272 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 VIPP01282 170 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYBL1P10243 752 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CASP1P29466 404 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 OR1E1P30953 314 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CTSOP43234 321 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SNRPD1P62314 119 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP4F8P98187 520 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ADIGQ0VDE8 80 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RSPO4Q2I0M5 234 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 C9orf57Q5W0N0 161 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RAPH1Q70E73 1250 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MCEMP1Q8IX19 187 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 DTWD2Q8NBA8 298 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 HSD17B14Q9BPX1 270 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ACBD6Q9BR61 282 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 WDR6Q9NNW5 1121 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PARVAQ9NVD7 372 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GDE1Q9NZC3 331 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 HCFC2Q9Y5Z7 792 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CDK5RAP2Q96SN8 1893 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RBM47A0AV96 593 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMEM247A6NEH6 219 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP2A6P11509 494 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 HOXC12P31275 282 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 LAMB3Q13751 1172 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 BRD3Q15059 726 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 NTRK3Q16288 839 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TTC19Q6DKK2 380 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SV2AQ7L0J3 742 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SDCCAG8Q86SQ7 713 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PARGQ86W56 976 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GRK7Q8WTQ7 553 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMEM125Q96AQ2 219 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLHDC7BQ96G42 594 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MCCC1Q96RQ3 725 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SELENONQ9NZV5 590 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 KIAA1522Q9P206 1035 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 IP6K2Q9UHH9 426 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 FBXO2Q9UK22 296 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SMG5Q9UPR3 1016 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 DNAJC16Q9Y2G8 782 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 INTS1Q8N201 2190 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYOM1P52179 1685 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRBV23OR9-2A0A075B6M9 112 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GOLGA6L7A0A1B0GV03 622 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TPD52L2O43399 206 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMCC1O94876 653 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms