RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 RAD51CO43502 376 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TADA2AO75478 443 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 BMP10O95393 424 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CYP2D6P10635 497 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CCNB1P14635 433 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CAPZA1P52907 286 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 VEPH1Q14D04 833 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 KIAA0930Q6ICG6 404 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM69Q86WT6 500 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SMYD4Q8IYR2 804 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PDPRQ8NCN5 879 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ACTRT2Q8TDY3 377 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 WNT8BQ93098 351 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PRMT6Q96LA8 375 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 FOPNLQ96NB1 174 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 GCNAQ96QF7 691 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MRPL46Q9H2W6 279 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RHOJQ9H4E5 214 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SEPT3Q9UH03 358 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PADI4Q9UM07 663 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SLC4A7Q9Y6M7 1214 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 COMMD3-BMI1R4GMX3 469 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SPDYE16A6NNV3 312 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 FOXO6A8MYZ6 492 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 M0QYV0 167 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 GYG2O15488 501 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MED24O75448 989 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 HMBSP08397 361 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 THRAP10827 490 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 HSPA1LP34931 641 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RECQLP46063 649 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TUFMP49411 452 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 DSG1Q02413 1049 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 NSUN2Q08J23 767 aaKnown RBP eCLIP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RCN1Q15293 331 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CEP57Q86XR8 500 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SLC7A14Q8TBB6 771 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MCRS1Q96EZ8 462 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM117Q9H0C3 514 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 DDX43Q9NXZ2 648 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 USP18Q9UMW8 372 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CCDC88CQ9P219 2028 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CYP2D7A0A087X1C5 515 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM191CA6NGB0 347 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RASSF10A6NK89 507 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PRMT3O60678 531 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 VPS26AO75436 327 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PDGFRAP16234 1089 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MAPK10P53779 464 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 DMC1Q14565 340 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 GRTP1Q5TC63 336 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ABI1Q8IZP0 508 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CRYBG2Q8N1P7 616 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ELMOD1Q8N336 334 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SLC22A17Q8WUG5 538 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PRPF18Q99633 342 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ADGRE3Q9BY15 652 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MANSC1Q9H8J5 431 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 LNPEPQ9UIQ6 1025 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ACOT9Q9Y305 439 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 FARP1Q9Y4F1 1045 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TULP3O75386 442 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 NOL4O94818 638 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TXNP10599 105 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PMLP29590 882 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ARHGDIAP52565 204 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TPI1P60174 286 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 BFSP2Q13515 415 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MROH9Q5TGP6 573 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PLEKHH3Q7Z736 793 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CTAGE3PQ8IX95 158 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 KYQ8NBH2 561 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RNF149Q8NC42 400 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF606Q8WXB4 792 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SEPT5Q99719 369 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 C2orf49Q9BVC5 232 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CALN1Q9BXU9 219 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 IGSF9Q9P2J2 1179 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 IGKV6D-21A0A0A0MT36 114 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 FZD9O00144 591 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RIPK2O43353 540 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ITGA10O75578 1167 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MYO1DO94832 1006 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CLCN5P51795 746 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PEX3P56589 373 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 IL18R1Q13478 541 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SLC12A1Q13621 1099 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PKN2Q16513 984 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 KLHDC10Q6PID8 442 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 HACD2Q6Y1H2 254 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ULK2Q8IYT8 1036 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SLC35B2Q8TB61 432 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 DYDC2Q96IM9 177 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 FZD8Q9H461 694 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CISHQ9NSE2 258 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TRPM7Q96QT4 1865 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SLC16A4O15374 487 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ADCY6O43306 1168 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms