RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SVOPQ8N4V2 548 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 KYQ8NBH2 561 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 MDM1Q8TC05 714 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 MAGED4Q96JG8 741 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 A0A088AWK7 358 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 ERI2A8K979 691 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 IGSF6O95976 241 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 ZNF10P21506 573 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 NFIAQ12857 509 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 MSLNQ13421 630 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 ANGPT1Q15389 498 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 GRIK4Q16099 956 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 MTERF3Q96E29 417 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 TMEM121Q9BTD3 319 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 KLHL4Q9C0H6 718 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 CAPN6Q9Y6Q1 641 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 NR5A2O00482 541 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 ACKR2O00590 384 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 TPST1O60507 370 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 KATNA1O75449 491 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 VIL1P09327 827 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 CNPP09543 421 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 GHRP10912 638 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 GNA13Q14344 377 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 PLCL1Q15111 1095 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 PKN1Q16512 942 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 SEZ6Q53EL9 994 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 ZNF571Q7Z3V5 609 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 OR56A4Q8NGH8 313 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 FBXO25Q8TCJ0 367 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 MCOLN3Q8TDD5 553 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 KCTD14Q9BQ13 255 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 BDH2Q9BUT1 245 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 ABHD16BQ9H3Z7 469 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 E9PBE3 544 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 XYLBO75191 536 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 GUCY1B2O75343 617 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 FASP25445 335 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 POLR2LP62875 67 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 BRSK2Q8IWQ3 736 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 SETD9Q8NE22 299 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 TMEM120AQ9BXJ8 343 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 MMADHCQ9H3L0 296 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 POLLQ9UGP5 575 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 PCNAP12004 261 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 AKR1A1P14550 325 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 GTF2E2P29084 291 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 PCBP1Q15365 356 aaKnown RBP eCLIP13.1□□□□□ -0.31
LDB3-205ENST00000429277 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 CIPCQ9C0C6 399 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 TCF7L2Q9NQB0 619 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 NCF1BA6NI72 391 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 NCF1CA8MVU1 366 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 TRDMT1O14717 391 aaKnown RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 TRIM13O60858 407 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 NCF1P14598 390 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 IRAK1BP1Q5VVH5 260 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 TMC7Q7Z402 723 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 REPS2Q8NFH8 660 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 ST13P5Q8NFI4 369 aaPredicted RBP13.1□□□□□ -0.31
LDB3-205ENST00000429277 MAGEC3Q8TD91 643 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 HTR3CQ8WXA8 447 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 LENG9Q96B70 501 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 SH3GL2Q99962 352 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
LDB3-205ENST00000429277 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 PDZK1P1A8MUH7 402 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 TRIM24O15164 1050 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 RGS5O15539 181 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 CPSF4O95639 269 aaKnown RBP13.09□□□□□ -0.31
LDB3-205ENST00000429277 GYS1P13807 737 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 SOX11P35716 441 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 IFNGR2P38484 337 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
LDB3-205ENST00000429277 SCNN1BP51168 640 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 KCNMA1Q12791 1236 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 FKBP1CQ5VVH2 108 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 FBXO39Q8N4B4 442 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 QRFPRQ96P65 431 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 POLE3Q9NRF9 147 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 THAP1Q9NVV9 213 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 FRMPD4Q14CM0 1322 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 TRIM66O15016 1216 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 HMGCRP04035 888 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 CXCL8P10145 99 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 MTM1Q13496 603 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ZFP1Q6P2D0 407 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ZBTB49Q6ZSB9 765 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms