RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LRRC47Q8N1G4 583 aaKnown RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 MAP6Q96JE9 813 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 C1orf21Q9H246 121 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 NEK6Q9HC98 313 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 EIF3DO15371 548 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 DYNC1LI2O43237 492 aaPredicted RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 CSDE1O75534 798 aaKnown RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 KRT6AP02538 564 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 KRT6BP04259 564 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 CAP2P40123 477 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 MAGEA4P43358 317 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 CACNB3P54284 484 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 ASIC1P78348 528 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 NFIAQ12857 509 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GRB10Q13322 594 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 BMT2Q1RMZ1 405 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 KLHL38Q2WGJ6 581 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 PPP6R3Q5H9R7 873 aaPredicted RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 AARS2Q5JTZ9 985 aaKnown RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 ATAD3BQ5T9A4 648 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 OTOP3Q7RTS5 596 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 DSG4Q86SJ6 1040 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 APOBEC3FQ8IUX4 373 aaKnown RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 PQLC1Q8N2U9 271 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 RASGRP4Q8TDF6 673 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 UPF1Q92900 1129 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 CCDC124Q96CT7 223 aaKnown RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 RMDN1Q96DB5 314 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GIMAP5Q96F15 307 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 C7orf26Q96N11 449 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 CLSTN3Q9BQT9 956 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 WDR18Q9BV38 432 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 TSSK1BQ9BXA7 367 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GANQ9H2C0 597 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 SMARCAD1Q9H4L7 1026 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 WHRNQ9P202 907 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 EPS15L1Q9UBC2 864 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 ATPIF1Q9UII2 106 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 IKBKGQ9Y6K9 419 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 DOCK1Q14185 1865 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 TCRBV7S2A1N4TA0A589 114 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 FAM25EA8MYX2 175 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 TAF4O00268 1085 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 ARHGEF15O94989 841 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 NELFEP18615 380 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 CFL1P23528 166 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 GRK2P25098 689 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 POLR2BP30876 1174 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 STAT3P40763 770 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 EPHB1P54762 984 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 MLLT6P55198 1093 aaPredicted RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 DLG4P78352 724 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 SLC25A3Q00325 362 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 GALNT2Q10471 571 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 DGKDQ16760 1214 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 PPP4R4Q6NUP7 873 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 FRA10AC1Q70Z53 315 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 KBTBD6Q86V97 674 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 TNIP2Q8NFZ5 429 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 SCUBE2Q9NQ36 999 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 KLQ9UEF7 1012 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 TRAF6Q9Y4K3 522 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 DICER1Q9UPY3 1922 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 IGSF9BQ9UPX0 1349 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 FAM237BA0A1B0GVD1 139 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 A0A1W2PPM1 405 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 hCG_1642624A0A1W2PR95 340 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 YDJCA8MPS7 323 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 MEIS2O14770 477 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 SLC16A3O15427 465 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 ZNF254O75437 659 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 TGDSO95455 350 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 H6PDO95479 791 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 HSPA6P17066 643 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 HADHAP40939 763 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 CDH15P55291 814 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 FKBP3Q00688 224 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 C19orf57Q0VDD7 668 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 PGS1Q32NB8 556 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 INAVAQ3KP66 663 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 ZBED5Q49AG3 693 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 HSF5Q4G112 596 aaPredicted RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 RALGPS1Q5JS13 557 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 NXNQ6DKJ4 435 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 CHERPQ8IWX8 916 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 KBTBD7Q8WVZ9 684 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 DCPSQ96C86 337 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 C12orf42Q96LP6 360 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 C9orf72Q96LT7 481 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 CDK5RAP1Q96SZ6 601 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 NUDT12Q9BQG2 462 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 CCDC77Q9BR77 488 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 C12orf65Q9H3J6 166 aaKnown RBP7.7□□□□□ -1.18
CDKL5-201ENST00000379989 MANSC1Q9H8J5 431 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 PLEKHA5Q9HAU0 1116 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 GDAP2Q9NXN4 497 aa7.7□□□□□ -1.18
CDKL5-201ENST00000379989 TXNDC16Q9P2K2 825 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms