RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RMND5BQ96G75 393 aaPredicted RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 NSMCE2Q96MF7 247 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TBCBQ99426 244 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 APOL4Q9BPW4 351 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 ADPRHL2Q9NX46 363 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 MROH7Q68CQ1 1323 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 A0A087WZ62 844 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CYP7B1O75881 506 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 VTNP04004 478 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 FAM58BPP0C7Q3 252 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 PGAM1P18669 254 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 ALDH9A1P49189 494 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SERPINH1P50454 418 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 C1QBPQ07021 282 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 DGKKQ5KSL6 1271 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 ARMC4Q5T2S8 1044 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 PLEKHA7Q6IQ23 1121 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 POMGNT2Q8NAT1 580 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 FIG4Q92562 907 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 FAM136AQ96C01 138 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TMEM79Q9BSE2 394 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 RBM22Q9NW64 420 aaKnown RBP eCLIP11.81□□□□□ -0.525e-7■■■■□ 25.8
VCL-202ENST00000372755 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 COPG2Q9UBF2 871 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 ERI2A8K979 691 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 PEX1O43933 1283 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SMNDC1O75940 238 aaKnown RBP eCLIP11.81□□□□□ -0.52
VCL-202ENST00000372755 RRM1P23921 792 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 PSMB9P28065 219 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 IFNGR2P38484 337 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 ITGA1P56199 1179 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SGCGQ13326 291 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TSNQ15631 228 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 SPANXN3Q5MJ09 141 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SAMD7Q7Z3H4 446 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TRMT11Q7Z4G4 463 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 REXO1L1PQ8IX06 675 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TRPC4APQ8TEL6 797 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 MED8Q96G25 268 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TCF7L2Q9NQB0 619 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 RBAK-RBAKDNI3L0D1 243 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SERPINE1P05121 402 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 OR56A5P0C7T3 313 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CBWD3Q5JTY5 395 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 FBXO47Q5MNV8 452 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CBWD5Q5RIA9 395 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 BNIPLQ7Z465 357 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 ERO1BQ86YB8 467 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 C4orf19Q8IY42 314 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CCDC33Q8N5R6 958 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 GMCL1P1Q8NEA9 526 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 OR56A4Q8NGH8 313 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SPPL2AQ8TCT8 520 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 USP7Q93009 1102 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CBWD1Q9BRT8 395 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CROTQ9UKG9 612 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 LRRC7Q96NW7 1537 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 F8VZ95 297 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CYP2A6P11509 494 aaPredicted RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 CASP4P49662 377 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 PAPD7Q5XG87 772 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 RIPOR1Q6ZS17 1223 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 FBXO39Q8N4B4 442 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SH3BP4Q9P0V3 963 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TRHDEQ9UKU6 1024 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CTDNEP1O95476 244 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 ALDH2P05091 517 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 MAPTP10636 758 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 PAICSP22234 425 aaKnown RBP11.81□□□□□ -0.52
VCL-202ENST00000372755 SLC1A6P48664 564 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 STX4Q12846 297 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 IZUMO2Q6UXV1 221 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 NT5DC3Q86UY8 548 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 UGT2B28Q9BY64 529 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 RNPEPQ9H4A4 650 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TFR2Q9UP52 801 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 CNTNAP2Q9UHC6 1331 aa11.81□□□□□ -0.52
VCL-202ENST00000372755 TSC22D2O75157 780 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ATP5BP06576 529 aaKnown RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 CNGA2Q16280 664 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 CDC73Q6P1J9 531 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 DHFR2Q86XF0 187 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 RXFP1Q9HBX9 757 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ARHGAP28Q9P2N2 729 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 NDUFAF1Q9Y375 327 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 TBX4P57082 545 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 MYL6P60660 151 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 PPIL2Q13356 520 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 NAB1Q13506 487 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 PDZK1Q5T2W1 519 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 CPNE1Q99829 537 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 CD248Q9HCU0 757 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 SF3B1O75533 1304 aaKnown RBP eCLIP11.8□□□□□ -0.521e-6■■■■■ 40.8
VCL-202ENST00000372755 CNTNAP4Q9C0A0 1308 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms