RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 FUBP3Q96I24 572 aaKnown RBP eCLIP8.59□□□□□ -1.03
MRPL55-211ENST00000366738 LRIG1Q96JA1 1093 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 HEXIM2Q96MH2 286 aaKnown RBP8.59□□□□□ -1.03
MRPL55-211ENST00000366738 PCDHB18PQ96TA0 734 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 CHP1Q99653 195 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 GTPBP2Q9BX10 602 aaKnown RBP8.59□□□□□ -1.03
MRPL55-211ENST00000366738 NUSAP1Q9BXS6 441 aaKnown RBP8.59□□□□□ -1.03
MRPL55-211ENST00000366738 B3GNT5Q9BYG0 378 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 ZNF518BQ9C0D4 1074 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 RNF38Q9H0F5 515 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 FAM124BQ9H5Z6 455 aaPredicted RBP8.59□□□□□ -1.03
MRPL55-211ENST00000366738 KRT82Q9NSB4 513 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 ZMYM5Q9UJ78 669 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 TSPAN16Q9UKR8 245 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.59□□□□□ -1.03
MRPL55-211ENST00000366738 RAXQ9Y2V3 346 aa8.59□□□□□ -1.03
MRPL55-211ENST00000366738 SPTA1P02549 2419 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 TRAV19A0A0A6YYK7 116 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 SOWAHDA6NJG2 315 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 EIF4E1BA6NMX2 242 aaKnown RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 H0Y626 953 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 M0QYV0 167 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 TULP2O00295 520 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 BEST1O76090 585 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 TRIM16O95361 564 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 SERPING1P05155 500 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 CFIP05156 583 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 CKMP06732 381 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 USP17L7P0C7H9 530 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 VDRP11473 427 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 FECHP22830 423 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 OPRD1P41143 372 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 PRKCIP41743 596 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 AMPD2Q01433 879 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 CDR2Q01850 454 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 KLHL30Q0D2K2 578 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 PDGFRLQ15198 375 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 SGO2Q562F6 1265 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 C2orf27AQ580R0 203 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 ARHGAP17Q68EM7 881 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 DENND1BQ6P3S1 775 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 LPCAT2Q7L5N7 544 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 SYT12Q8IV01 421 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 CPA6Q8N4T0 437 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 TTC39CQ8N584 583 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 CCDC33Q8N5R6 958 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 C1orf131Q8NDD1 294 aaKnown RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 ZMIZ2Q8NF64 920 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 ZNF397Q8NF99 534 aaPredicted RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 MYCBPAPQ8TBZ2 947 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 MDM1Q8TC05 714 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 USP33Q8TEY7 942 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 ZNF606Q8WXB4 792 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 ANP32BQ92688 251 aaKnown RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 SYN2Q92777 582 aaPredicted RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 CYFIP2Q96F07 1278 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 TNIP3Q96KP6 325 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 SPATA17Q96L03 361 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 PANX2Q96RD6 677 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 PPP1R9BQ96SB3 815 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 TTLL2Q9BWV7 592 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 KCNF1Q9H3M0 494 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 DUS2Q9NX74 493 aaKnown RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 UXTQ9UBK9 157 aaPredicted RBP8.58□□□□□ -1.04
MRPL55-211ENST00000366738 CYTH4Q9UIA0 394 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 ARHGAP26Q9UNA1 814 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 PCDH15Q96QU1 1955 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 PLXNB3Q9ULL4 1909 aa8.58□□□□□ -1.04
MRPL55-211ENST00000366738 GOLGA4Q13439 2230 aaKnown RBP8.57□□□□□ -1.04
MRPL55-211ENST00000366738 ZNF840PA6NDX5 716 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 CYSRT1A8MQ03 144 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 UPK3BL1B0FP48 263 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 UPK3BL2E5RIL1 263 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 F8VP50 259 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 K7EQS6 105 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 LEFTY2O00292 366 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 DDX3XO00571 662 aaKnown RBP eCLIP8.57□□□□□ -1.043e-7■■□□□ 12.9
MRPL55-211ENST00000366738 TNFRSF10BO14763 440 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 OLFM2O95897 454 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 PRB1P04280 392 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 TCF3P15923 654 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 HDCP19113 662 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 ITPKAP23677 461 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
MRPL55-211ENST00000366738 GRIK1P39086 918 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 PGFP49763 221 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 ATXN3P54252 364 aaPredicted RBP8.57□□□□□ -1.04
MRPL55-211ENST00000366738 GSDMDP57764 484 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 CCZ1BP86790 482 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 CCZ1P86791 482 aaPredicted RBP8.57□□□□□ -1.04
MRPL55-211ENST00000366738 ZNF423Q2M1K9 1284 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 ASTE1Q2TB18 679 aaPredicted RBP8.57□□□□□ -1.04
MRPL55-211ENST00000366738 PKDCCQ504Y2 493 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 LYSMD4Q5XG99 296 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 SLC23A3Q6PIS1 610 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 LCLAT1Q6UWP7 414 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 VSTM1Q6UX27 236 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 TMEM92Q6UXU6 159 aa8.57□□□□□ -1.04
MRPL55-211ENST00000366738 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms