RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 INAVAQ3KP66 663 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 FAM98BQ52LJ0 330 aaKnown RBP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 C9orf131Q5VYM1 1079 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 FAAH2Q6GMR7 532 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 ESRP1Q6NXG1 681 aaKnown RBP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 SLC30A9Q6PML9 568 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 VN1R5Q7Z5H4 357 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 HJURPQ8NCD3 748 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 OR56A4Q8NGH8 313 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 SEZ6LQ9BYH1 1024 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 EPB41L4BQ9H329 900 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 HMG20AQ9NP66 347 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 LZTS1Q9Y250 596 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 FAM186AA6NE01 2351 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 LYNP07948 512 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 ENO2P09104 434 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 CTSEP14091 401 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 TGFBR2P37173 567 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 CD151P48509 253 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 ITGADQ13349 1161 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 TRMT11Q7Z4G4 463 aaKnown RBP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 ARID3BQ8IVW6 561 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 PEX5LQ8IYB4 626 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 TMEM199Q8N511 208 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 DNAJC9Q8WXX5 260 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 ANKS1AQ92625 1134 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 VCPIP1Q96JH7 1222 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 NPHS2Q9NP85 383 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 USP42Q9H9J4 1324 aaKnown RBP4.17□□□□□ -1.74
SCN3A-201ENST00000283254 CPS1P31327 1500 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 DLC1Q96QB1 1528 aa4.17□□□□□ -1.74
SCN3A-201ENST00000283254 COMTP21964 271 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KLRC2P26717 231 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HOXC12P31275 282 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 FLT3P36888 993 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PPP4CP60510 307 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SPIDRQ14159 915 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 NKX1-1Q15270 411 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 EPHA10Q5JZY3 1008 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ARMC4Q5T2S8 1044 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TLK2Q86UE8 772 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 EXOC3L1Q86VI1 746 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ANKMY2Q8IV38 441 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 C4orf33Q8N1A6 199 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CENPTQ96BT3 561 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 C9orf72Q96LT7 481 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SLC25A23Q9BV35 468 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RNF208Q9H0X6 261 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TMEM39AQ9NV64 488 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 BTBD7Q9P203 1132 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TRIM10Q9UDY6 481 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MFHAS1Q9Y4C4 1052 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TRIOBPQ9H2D6 2365 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RIC1Q4ADV7 1423 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 EIF4E1BA6NMX2 242 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 BAIAP3O94812 1187 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ADH1CP00326 375 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ALDH2P05091 517 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MAPKAPK2P49137 400 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PSMC6P62333 389 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 GCNT1Q02742 428 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SMARCB1Q12824 385 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KYNUQ16719 465 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TRMT5Q32P41 509 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CCDC153Q494R4 210 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TRIQKQ629K1 86 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PDPK2PQ6A1A2 396 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SLC25A24Q6NUK1 477 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 C3orf62Q6ZUJ4 267 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CEP68Q76N32 757 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 GJD3Q8N144 294 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SVOPQ8N4V2 548 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RASGEF1AQ8N9B8 481 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 USP38Q8NB14 1042 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HEXDCQ8WVB3 486 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 NSL1Q96IY1 281 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SH3GL3Q99963 347 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TBCDQ9BTW9 1192 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 REXO4Q9GZR2 422 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CAAP1Q9H8G2 361 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 XPNPEP3Q9NQH7 507 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 WHRNQ9P202 907 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SLC24A2Q9UI40 661 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 OR10H1Q9Y4A9 318 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SPATA31A1Q5TZJ5 1347 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MYL12BO14950 172 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ACSL4O60488 711 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CAMTA2O94983 1202 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HIST1H2ABP04908 130 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KCNA3P22001 575 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ITGA8P53708 1063 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 NR6A1Q15406 480 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KLHDC7AQ5VTJ3 777 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 FBXO42Q6P3S6 717 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ZPBP2Q6X784 338 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HIST3H2AQ7L7L0 130 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SLC13A5Q86YT5 568 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 GPC2Q8N158 579 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms