RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 CPA2P48052 419 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 PRIM2P49643 509 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 DDX39BQ13838 428 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 NT5DC3Q86UY8 548 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 TSPAN18Q96SJ8 248 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 VAT1Q99536 393 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 FUCA2Q9BTY2 467 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 CTNNAL1Q9UBT7 734 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 PCDHA3Q9Y5H8 950 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 SPATA31C2B4DYI2 1134 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 TRIP10Q15642 601 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 CXCL17Q6UXB2 119 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 CSGALNACT1Q8TDX6 532 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 LACRTQ9GZZ8 138 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 F8W810 466 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 BDNFP23560 247 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 CYP2C18P33260 490 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 CDH8P55286 799 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 SGCGQ13326 291 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 SPANXN3Q5MJ09 141 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 TFAP2DQ7Z6R9 452 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 TRPM4Q8TD43 1214 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 IL1RL2Q9HB29 575 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 SPG21Q9NZD8 308 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 C6orf203Q9P0P8 240 aaPredicted RBP13.61□□□□□ -0.23
SMG9-201ENST00000270066 DGKIO75912 1065 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 TPBGLP0DKB5 382 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 PTPN1P18031 435 aaKnown RBP13.61□□□□□ -0.23
SMG9-201ENST00000270066 PGAM1P18669 254 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 MLH1P40692 756 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 SCNN1GP51170 649 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 DNAJC3Q13217 504 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 ZNF438Q7Z4V0 828 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 SCUBE3Q8IX30 993 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 COPS5Q92905 334 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 C18orf25Q96B23 403 aaPredicted RBP13.61□□□□□ -0.23
SMG9-201ENST00000270066 ANKZF1Q9H8Y5 726 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 PHTF1Q9UMS5 762 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 TSC22D4Q9Y3Q8 395 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 A0A087X0B3 334 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 ZBTB39O15060 712 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 GRK2P25098 689 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 CD151P48509 253 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 GRTP1Q5TC63 336 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 HIC2Q96JB3 615 aa13.61□□□□□ -0.23
SMG9-201ENST00000270066 TM9SF1O15321 606 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 NQO1P15559 274 aaKnown RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 CYP2A7P20853 494 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 SERPINB10P48595 397 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 NEK2P51955 445 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 KAT2BQ92831 832 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 SMPD4Q9NXE4 827 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 CDH9Q9ULB4 789 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.233e-13■■■■■ 86.2
SMG9-201ENST00000270066 ATRNO75882 1429 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 THRAP10827 490 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 PLCL1Q15111 1095 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 KCNK18Q7Z418 384 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 PTAR1Q7Z6K3 402 aaPredicted RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 WDR41Q9HAD4 459 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 FGF10O15520 208 aaPredicted RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMG9-201ENST00000270066 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 GALNT4Q8N4A0 578 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 LENG9Q96B70 501 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 TBL1YQ9BQ87 522 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 KRCC1Q9NPI7 259 aaPredicted RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 NCKIPSDQ9NZQ3 722 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 UBA2Q9UBT2 640 aaPredicted RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 SOX13Q9UN79 622 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 SLC9A3R1O14745 358 aaPredicted RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 USP17L7P0C7H9 530 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 ERVK-10P10266 1014 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 ZNF7P17097 686 aaPredicted RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 AMPD1P23109 780 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 PTPN3P26045 913 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 TMED10P49755 219 aaKnown RBP13.6□□□□□ -0.23
SMG9-201ENST00000270066 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 DAB2IPQ5VWQ8 1189 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 SEL1L3Q68CR1 1132 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 LAYNQ6UX15 382 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 CASP10Q92851 521 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 ULBP1Q9BZM6 244 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 TMBIM4Q9HC24 238 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 MSRAQ9UJ68 235 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
SMG9-201ENST00000270066 KRT87PA6NCN2 255 aa13.59□□□□□ -0.23
SMG9-201ENST00000270066 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
SMG9-201ENST00000270066 NOS2P35228 1153 aa13.59□□□□□ -0.23
SMG9-201ENST00000270066 CRYBB1P53674 252 aaPredicted RBP13.59□□□□□ -0.23
SMG9-201ENST00000270066 CYLC2Q14093 348 aaPredicted RBP13.59□□□□□ -0.23
SMG9-201ENST00000270066 MFSD4BQ5TF39 518 aa13.59□□□□□ -0.23
SMG9-201ENST00000270066 THUMPD3Q9BV44 507 aaKnown RBP13.59□□□□□ -0.23
SMG9-201ENST00000270066 UBP1Q9NZI7 540 aa13.59□□□□□ -0.23
SMG9-201ENST00000270066 E5RJQ4 531 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms