RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SPPL2AQ8TCT8 520 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 VPS26AO75436 327 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 SEMA3DO95025 777 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 NCAM1P13591 858 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 BGNP21810 368 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 DCLRE1BQ9H816 532 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 COPG2Q9UBF2 871 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 KANSL1LA0AUZ9 987 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 AHCYL1O43865 530 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 MT-CO1P00395 513 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 FGFR2P21802 821 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 GTF2H1P32780 548 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 LPIN1Q14693 890 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 KDM7AQ6ZMT4 941 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 MIB1Q86YT6 1006 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 CDK20Q8IZL9 346 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 DEFB107AQ8IZN7 70 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 TMEM199Q8N511 208 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 DGCR6LQ9BY27 220 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 CXCL11O14625 94 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 MYL12BO14950 172 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 AREL1O15033 823 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 SCGNO76038 276 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ALDH2P05091 517 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ALX1Q15699 326 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 TAB1Q15750 504 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 AGKQ53H12 422 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 KBTBD2Q8IY47 623 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 FBXO36Q8NEA4 188 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 RNF19AQ9NV58 838 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 SLC9A8Q9Y2E8 581 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 PDXKO00764 312 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 IFNA14P01570 189 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ERVK-10P10266 1014 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 SV2CQ496J9 727 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ZC2HC1CQ53FD0 456 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 EID3Q8N140 333 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 MRPS31Q92665 395 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 FAR2Q96K12 515 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 TARS2Q9BW92 718 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ITIH6Q6UXX5 1313 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 RGS20O76081 388 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 EYA4O95677 639 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 CD4P01730 458 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 CNPP09543 421 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 WARSP23381 471 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 HARS2P49590 506 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ACVR2BQ13705 512 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 TTLL9Q3SXZ7 439 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 CCSAPQ6IQ19 270 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 GJB7Q6PEY0 223 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 NOA1Q8NC60 698 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 RORBQ92753 470 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 POLR1DQ9Y2S0 133 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 COQ6Q9Y2Z9 468 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 RBP3P10745 1247 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 MYL12AP19105 171 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 CTNNB1P35222 781 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 DCTN2Q13561 401 aaKnown RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 ATG14Q6ZNE5 492 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 RMND5BQ96G75 393 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 CIPCQ9C0C6 399 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 DYRK1BQ9Y463 629 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 TIMM13Q9Y5L4 95 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-202ENST00000262676 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
TTC39A-202ENST00000262676 C2orf81A6NN90 581 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 H3BN98 237 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 H3BRB1 525 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 FASP25445 335 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 STARP49675 285 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 RAD23AP54725 363 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 PURAQ00577 322 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 METTL16Q86W50 562 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 PGLYRP2Q96PD5 576 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 OXCT2Q9BYC2 517 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SEMA6AQ9H2E6 1030 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 TUT1Q9H6E5 874 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 SSNA1O43805 119 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 CDH18Q13634 790 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 CBFBQ13951 182 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 FAM98BQ52LJ0 330 aaKnown RBP13.16□□□□□ -0.3
TTC39A-202ENST00000262676 C2CD6Q53TS8 623 aa13.16□□□□□ -0.3
TTC39A-202ENST00000262676 FGD3Q5JSP0 725 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms