RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KIAA1683Q9H0B3 1180 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 APPL1Q9UKG1 709 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 DNPEPQ9ULA0 475 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 ADAMTS13Q76LX8 1427 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 HSMCR30P0CW71 290 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 APOBEC3HQ6NTF7 200 aaKnown RBP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 TRPC4APQ8TEL6 797 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 LNPEPQ9UIQ6 1025 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 CAB39Q9Y376 341 aaPredicted RBP19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 TRIM17Q9Y577 477 aa19.16■□□□□ 0.66
SMARCC1-201ENST00000254480 PHKG1Q16816 387 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 TCHHL1Q5QJ38 904 aaPredicted RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 PAPD7Q5XG87 772 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 PAWRQ96IZ0 340 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 CYP3A43Q9HB55 503 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 ETS1P14921 441 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 HPGDP15428 266 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 CRADDP78560 199 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 DSG1Q02413 1049 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 ACVR2BQ13705 512 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 RIPOR1Q6ZS17 1223 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 SYTL1Q8IYJ3 562 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 EMILIN2Q9BXX0 1053 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 H3BQF6 201 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 LSM8O95777 96 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 YBX3P16989 372 aaKnown RBP eCLIP19.15■□□□□ 0.663e-7■■■□□ 17.1
SMARCC1-201ENST00000254480 MSH3P20585 1137 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 VHLP40337 213 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 SLC26A2P50443 739 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 CHRNB3Q05901 458 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 ACOX1Q15067 660 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 SAC3D1A6NKF1 404 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 NQO1P15559 274 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 VEGFAP15692 232 aaPredicted RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 ARHGAP17Q68EM7 881 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 ZNF470Q6ECI4 717 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 CYB5D1Q6P9G0 228 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 NPNTQ6UXI9 565 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 LRRC8DQ7L1W4 858 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 NECAB2Q7Z6G3 386 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 RMND5AQ9H871 391 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 HNRNPH1P31943 449 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 CLK2P49760 499 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 C15orf59Q2T9L4 293 aaPredicted RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 KCNMB4Q86W47 210 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 SNRNP27Q8WVK2 155 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 CCDC3Q9BQI4 270 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 TKTL2Q9H0I9 626 aa19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 A1CFQ9NQ94 594 aaKnown RBP19.15■□□□□ 0.66
SMARCC1-201ENST00000254480 HMGCRP04035 888 aa19.14■□□□□ 0.66
SMARCC1-201ENST00000254480 RARAP10276 462 aa19.14■□□□□ 0.66
SMARCC1-201ENST00000254480 YWHAZP63104 245 aaKnown RBP19.14■□□□□ 0.66
SMARCC1-201ENST00000254480 FSCN1Q16658 493 aaKnown RBP19.14■□□□□ 0.66
SMARCC1-201ENST00000254480 FIG4Q92562 907 aa19.14■□□□□ 0.66
SMARCC1-201ENST00000254480 PXDNQ92626 1479 aa19.14■□□□□ 0.66
SMARCC1-201ENST00000254480 F8VP50 259 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 POU5F2Q8N7G0 328 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 ADAM2Q99965 735 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 MIEF1Q9NQG6 463 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 OLFML3Q9NRN5 406 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 KPNA1P52294 538 aaPredicted RBP19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 NETO2Q8NC67 525 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 DUSP9Q99956 384 aaKnown RBP19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 NRXN1Q9ULB1 1477 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 GRK3P35626 688 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 PSEN2P49810 448 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 CASP5P51878 434 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 STN1Q9H668 368 aaKnown RBP19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 UBOX5O94941 541 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 SERPINF2P08697 491 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 PECAM1P16284 738 aaPredicted RBP19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 FMO4P31512 558 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 NCKAP1LP55160 1127 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 ERVK-9P63128 1117 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 VGLL4Q14135 290 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 CXCL17Q6UXB2 119 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 MOB2Q70IA6 237 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 HTR3CQ8WXA8 447 aa19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 DRG1Q9Y295 367 aaKnown RBP19.14■□□□□ 0.65
SMARCC1-201ENST00000254480 LOC102724159A0A0B4J2E5 919 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 TRDMT1O14717 391 aaKnown RBP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 RECQL4O94761 1208 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 VCLP18206 1134 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 SCTRP47872 440 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 MGAT5Q09328 741 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 PWP2Q15269 919 aaKnown RBP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 NFE2Q16621 373 aaPredicted RBP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 GLT6D1Q7Z4J2 308 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 SPATA20Q8TB22 786 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 RGS18Q9NS28 235 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 TAS2R14Q9NYV8 317 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 DDX3XO00571 662 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 YWHAQP27348 245 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 SMARCD1Q96GM5 515 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 NMRK1Q9NWW6 199 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 FBXO10Q9UK96 956 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 GJB1P08034 283 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 MIPP30301 263 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 SLC1A6P48664 564 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 SLC12A3P55017 1021 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms